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. 2019 Oct 2;10:2263. doi: 10.3389/fmicb.2019.02263

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Copyright © 2019 Song, Chen, Xu, Hai, Zhou, Tian, Van Nostrand, Kempher, Guo, Sun and Zhou.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Genome alignment of strains C1^T, QYY and NBRC 107872. (A) Genome alignment by Mauve. Each of colored blocks represents a presumably homologous region. Blocks above/below the center line respectively indicate aligned regions in the forward/reverse (reverse complement) orientation. The height of the similarity profile inside each block corresponds to the level of sequence conservation. The positions of prophages and GIs in the C1^T genome are shown correspondingly at the top. (B) Genome alignment by Mummer. Red/blue dots correspond to pairs of homologous sequences in the forward/reverse (reverse complement) orientation.