Table 3.
Read counts of circRNA and microRNAs that are potentially associated.
| circRNA | circRNA Read Counts *** | miRNA | miRNA Read Counts | Inhibiton By | |||
|---|---|---|---|---|---|---|---|
| AGO-IP | Total RNA | AGO1-DDH | AGO1-DAH | Empty Vector | |||
| circ_At1g12080 ** | 175 | 13 | miR4221-5p * | 265 | 171 | 7 | Cleavage |
| miR838-3p * | 226 | 59 | 41 | Translation | |||
| - | - | - | miR397a-5p * | 1014 | 520 | 29 | Translation |
| - | - | - | miR5654-3p | 2 | 0 | 0 | Cleavage |
| circ_At2g35940 | 8 | 0 | miR8182-5p * | 2 | 9 | 0 | Translation |
| - | - | - | miR830-3p * | 29 | 13 | 0 | Cleavage |
| - | - | - | miR833a-5p * | 50 | 35 | 17 | Translation |
| - | - | - | miR8174-3p | - | - | - | Cleavage |
| circ_At2g42170 | 8 | 0 | miR831-3p * | 81 | 11 | 3 | Translation |
| - | - | - | miR838-3p * | 226 | 59 | 41 | Cleavage |
| - | - | - | miR4239-5p * | 17 | 7 | 0 | Translation |
| circ_At3g13990 ** | 17 | 0 | miR5637-5p | - | - | - | Cleavage |
| - | - | - | miR780.2-3p | - | - | - | Cleavage |
| circ_At5g27720 | 17 | 0 | miR838-3p * | 226 | 59 | 41 | Cleavage |
* miRNA considered enriched in AGO-IP libraries; ** circRNAs validated; *** Read count normalized by the library size and with difference between assembled AGO-IPs (AGO-DAH/DDH) and Input libraries (p < 0.05); Expectation value ≤5.