Table 2. Summary of the read numbers in the different file types of the IsoSeq data set.
Size fraction | |||||||
---|---|---|---|---|---|---|---|
Library | < 1kb | 1-2kb | 2-3kb | 3-4kb | 4-5kb | 5-6kb | > 6kb |
1-2kb_high | 7310 | 31953 | 17 | 0 | 0 | 0 | 0 |
1-2kb_low | 903 | 5908 | 170 | 110 | 89 | 39 | 80 |
2-3kb_high | 596 | 2703 | 37399 | 217 | 443 | 147 | 0 |
2-3kb_low | 78 | 586 | 7749 | 116 | 301 | 134 | 215 |
3-6kb_high | 8 | 13 | 552 | 28621 | 4603 | 20 | 388 |
3-6kb_low | 0 | 6 | 268 | 8830 | 1535 | 74 | 418 |
The suffixes “_high” and “_low” refers to the high- and low-quality sequences produced by the IsoSeq sequencing. The data files have the following accession numbers: 1-2kb_high – ERR2869477; 1-2kb_low - ERR2882521; 2-3kb_high - ERR2869478; 2-3kb_low - ERR2869481; 3-6kb_high - ERR2869483; 3-6kb_low - ERR2869484.