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. 2019 Oct 9;14(10):e0223639. doi: 10.1371/journal.pone.0223639

Table 1. Top 15 light HNSCC mutation enriched pathways.

Pathway Number of Mutated Genes Proportion Pathway Mutated Proportion of HNSCC cohort with ≥1 mutated gene in pathway Number of patients with ≥1 mutated gene in pathway
Nephrin interactions 22 1 0.35502959 180
Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants 19 1 0.28796844 146
Constitutive Signaling by EGFRvIII 15 1 0.2800789 142
TRP channels 25 1 0.24457594 124
Ras activation uopn Ca2+ infux through NMDA receptor 17 1 0.23076923 117
Unblocking of NMDA receptor, glutamate binding and activation 17 1 0.21893491 111
Kinesins 27 1 0.21696252 110
Caspase-mediated cleavage of cytoskeletal proteins 12 1 0.20512821 104
Sema3A PAK dependent Axon repulsion 16 1 0.19329389 98
CRMPs in Sema3A signaling 16 1 0.16962525 86
DSCAM interactions 11 1 0.15384615 78
Growth hormone receptor signaling 24 1 0.14201183 72
Mitotic Telophase/Cytokinesis 14 1 0.13806706 70
Na+/Cl- dependent neurotransmitter transporters 19 1 0.12031558 61
Recycling of bile acids and salts 15 1 0.11637081 59

Light pathways ranked first according to proportion of pathway mutated and second according to proportion of cohort with mutated gene.