Table 1. Top 15 light HNSCC mutation enriched pathways.
Pathway | Number of Mutated Genes | Proportion Pathway Mutated | Proportion of HNSCC cohort with ≥1 mutated gene in pathway | Number of patients with ≥1 mutated gene in pathway |
---|---|---|---|---|
Nephrin interactions | 22 | 1 | 0.35502959 | 180 |
Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants | 19 | 1 | 0.28796844 | 146 |
Constitutive Signaling by EGFRvIII | 15 | 1 | 0.2800789 | 142 |
TRP channels | 25 | 1 | 0.24457594 | 124 |
Ras activation uopn Ca2+ infux through NMDA receptor | 17 | 1 | 0.23076923 | 117 |
Unblocking of NMDA receptor, glutamate binding and activation | 17 | 1 | 0.21893491 | 111 |
Kinesins | 27 | 1 | 0.21696252 | 110 |
Caspase-mediated cleavage of cytoskeletal proteins | 12 | 1 | 0.20512821 | 104 |
Sema3A PAK dependent Axon repulsion | 16 | 1 | 0.19329389 | 98 |
CRMPs in Sema3A signaling | 16 | 1 | 0.16962525 | 86 |
DSCAM interactions | 11 | 1 | 0.15384615 | 78 |
Growth hormone receptor signaling | 24 | 1 | 0.14201183 | 72 |
Mitotic Telophase/Cytokinesis | 14 | 1 | 0.13806706 | 70 |
Na+/Cl- dependent neurotransmitter transporters | 19 | 1 | 0.12031558 | 61 |
Recycling of bile acids and salts | 15 | 1 | 0.11637081 | 59 |
Light pathways ranked first according to proportion of pathway mutated and second according to proportion of cohort with mutated gene.