Extended Data Table 2 |.
Height1 | BMI2 | |||||||
---|---|---|---|---|---|---|---|---|
Analysis | known loci3 |
novel loci4 |
novel, shared5 |
novel, unshared6 |
known3 | novel4 | novel, shared5 |
novel, unshared6 |
GIANT-only GWAS | 425 | 0 | 74 | 0 | ||||
PAGE-only GWAS | 46 | 8 | 9 | 0 | ||||
UKB50k-only GWAS | 91 | 1 | 8 | 2 | ||||
GIANT+PAGE meta | 4057 | 82 | 37 | 647 | 38 | 31 | ||
45 | 7 | |||||||
GIANT+UKB50k meta | 4127 | 107 | 62 | 677 | 28 | 21 |
Meta-analysis with previously reported height data24.
Meta-analysis with previously reported BMI data23.
Known loci include only the 425 height loci and 74 BMI loci from GIANT.
Novel loci were identified as P > 5 × 10−8 in the GIANT-only dataset and P > 5 × 10−8 in the specified analyses.
Novel, shared loci were identified as P > 5 × 10−9 in both GIANT+PAGE and GIANT+UKB50k datasets.
Novel, unshared loci were identified as P > 5 × 10−9 in either GIANT+PAGE or GIANT+UKB50k, but not in both datasets.
A modest number of known loci were significant in the GIANT-only GWAS, but not in the meta-analyses. These known loci were still included in PVE calculations.