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. Author manuscript; available in PMC: 2020 Oct 1.
Published in final edited form as: Int J Numer Method Biomed Eng. 2019 Sep 5;35(10):e3250. doi: 10.1002/cnm.3250

Table 1.

Summary of requirements and recommendations for brain biomechanics modeling depending on application, based on the Intelligent Systems for Medicine Laboratory’s (ISML) 23 years of experience.

Type of Application
Intraoperative neuroimage registration Neurosurgical simulation for training and/or skill assessment Neurosurgical simulation for operation planning
Patient specific? Yes No Yes
Model components Brain parenchyma (separate treatment of gray and white matter not necessary), CSF (especially in ventricles), tumor. Explicit modeling of the brain vasculature — not needed Depends on specific application
Real time? Yes, ca. between 40 s and 90 s to compute deformations and warp image. Practical limit can be defined as the time a neuro-surgeon is willing/can wait for the modeling results. Yes, haptic rate 500 Hz or better
Source of geometric information Anatomical MRI Electronic brain atlas Anatomical MRI
Rapid generation of computational grid Needed Not needed Needed
Spatial discretization method Meshless Finite elements Meshless
Reliable computation of displacements Needed Needed
Reliable computation of internal stresses Not needed Not needed
Reliable computation of reaction forces (e.g. acting on surgical tools) Not needed Needed
Loading Enforced motion of the exposed brain surface (measured intraoperatively) Enforced motion of the boundary (at the contact with the virtual tool)
Constitutive model of intracranial constituents The simplest model compatible with finite deformation solution procedure: Neo-Hookean Deformation gradients computed using the simplest model (Neo-Hookean) compatible with the finite deformation procedure are resubstituted to realistic constintutive model (we recommend Ogden-type) in the vicinity of the surgical tool where the reactions acting on surgical tool need to be computed.
Brain-skull interaction model Frictionless finite sliding with separation
Solution procedure Fully geometrically and materially nonlinear
Time stepping Explicit with dynamic relaxation, the simplest central differences Explicit, time-accurate, the simplest central differences
Practical model size 40–100 × 103 degrees of freedom 40–100 × 103 degrees of freedom for computational grid, more can be used for visualization.
Solution algorithm verification Against a converged finite element solution using hybrid (i.e. displacement-pressure formulation) finite elements
Model validation Against intraoperative imaging, preferable intraoperative MRI N/A. However, expert user feedback may be useful