Table 2.

Potential Antigenic Epitopes Predicted by Different Servers

										T cell epitopes
				B cell epitopes						IEDB		ProPred		NetMHC
Order	Protein	Position	Sequence	BepiPred	BCPRED	ABCpred	DiscoTope	ElliPro	BcePred	I	II	I	II	I	II
1	NapA	30–49	GTDFFNVHKATEEIYEEFAD	0.520	0.573	0.31	−7.806	0.511	0.826	6H 2M	5H 0M	17H 3M	10H	31H 1M	12H 0M
2	CagA	1103–1122	IVAHNVGSVPLSEYDKIGFN	0.087	0.45	0.86	−0.852	0.928	0.953	8H 3M	6H 0M	24H 6M	16H	34H 1M	7H 0M
3	FlaA	487–506	LAQSGSYAMSQANTVQQNIL	0.136	0.363	0.82	−4.984	0.916	0.935	10H 3M	5H 1M	19H 5M	10H	46H 2M	13H 1M
4	OipA	211–230	ASTWFASNNLTPFNQVKSHT	0.557	0.892	0.35	−2.603	0.564	0.714	10H 2M	2H 0M	27H 3M	3H	46H 2M	11H 0M
5	GGT	106–126	APLKATKNMFLDKQGNVVPKL	0.553	0.697	0.42	−5.047	0.705	0.925	8H 2M	4H 1M	29H 6M	11H	43H 2M	14H 0M
6	HpaA	33–52	IETNEVALKLNYHPASEKVQ	0.627	0.21	0.8	−5.593	0.401	0.812	9H 1M	7H 0M	23H 2M	21H	37H 3M	7H 0M
7	BabA	129–149	NANGQKSTSSTTIFNNEPGYR	1.243	0.969	0.67	−11.203	0.678	0.812	13H 2M	3H 0M	16H 4M	0H	35H 2M	5H 0M
8	FecA	437–456	NLVVNTGKVKQTFNMGMRFL	−0.398	0.617	0.85	−3.091	0.681	0.842	9H 2M	8H 0M	26H 5M	34H	32H 2M	15H 1M
9	SabA	540–559	WLNSQYVNLTAFNNPYSAKV	0.546	0.621	0.76	−4.667	0.907	0.885	14H 3M	7H 0M	26H 5M	28H	67H 3M	16H 0M
10	VacA	459–478	NQVGGYALAGSSANFEFKAG	0.563	0.558	0.85	−13.843	0.261	0.893	6H 2M	5H 2M	15H 4M	11H	38H 2M	11H 1M
11	UreB	170–189	TTITPGRRNLKWMLRAAEEY	0.649	0.845	0.87	−3.764	0.584	0.790	9H 1M	6H 1M	21H 3M	15H	39H 2M	13H 0M

H, human; I, MHC class I; II, MHC class II; M, mouse.