Table 2.
Protein | Ligand | DE | BE | IE | TE | IC | USE | H-Bonds | Bonding amino acid |
---|---|---|---|---|---|---|---|---|---|
COX-2 | Cur | − 10.366 | − 3.90 | − 2.89 | 3.58 | 1.39 mM | − 2.89 | 7 |
(2)His351, Gln565, Gln350, Arg109, Leu359, Asp347 |
Cap | − 8.757 | − 3.80 | − 1.67 | 3.28 | 1.63 mM | − 1.67 | 2 | Ala562, Gln350 | |
Cur + Cap | − 10.823 | − 4.24 | − 3.00 | 3.58 | 775.25 µM | − 3.00 | – | – | |
IL-6 | Cur | − 10.856 | − 4.49 | − 2.79 | 3.58 | 511.14 µM | − 2.79 | 2 | Gln75, Cys73 |
Cap | − 9.634 | − 4.78 | − 1.57 | 3.28 | 311.41 µM | − 1.57 | 3 | Gln183, Cys73, Ser176 | |
Cur + Cap | − 10.189 | − 5.35 | − 1.55 | 3.28 | 118.98 µM | − 1.55 | – | – | |
TGF-β | Cur | − 11.895 | − 5.61 | − 2.70 | 3.58 | 76.68 µM | − 2.70 | 4 | (2)Arg25, (2)Lys37 |
Cap | − 11.243 | − 5.76 | − 1.90 | 3.58 | 60.02 µM | − 1.90 | 4 | (2)Arg25, (2)Tyr91 | |
Cur + Cap | − 9.439 | − 5.83 | − 0.33 | 3.28 | 53.42 µM | − 0.33 | – | – |
Cur curcumin, Cap capsaicin, Cur + Cap curcumin + capsaicin, DE docking energy (kJ/mol), BE binding energy (kcal/mol), IC inhibitory constant, IE internal energy, TE torsional energy (kcal/mol), USE unbound system’s energy (Kcal/mol), Cluster RMSD: 0.00