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. 2019 Oct 11;10:4632. doi: 10.1038/s41467-019-12610-x

Fig. 3.

Fig. 3

ZC3H18 depletion causes hypermethylation of the BRCA1 promoter. a Map of the divergent BRCA1/NBR2 promoter with CpG islands indicated by circles below the map. Methylation patterns obtained by bisulfite sequencing of 10 individual clones of PCR products from genomic DNA of control luciferase (Luc) and ZC3H18 siRNA (siZC3)-transfected OVACR-8 cells. Methylated (filled circles) and unmethylated (open circles) CpG positions are shown. b ChIP assays showing increased DNMT1 occupancy on the BRCA1 promoter in ZC3H18-depleted cells. OVCAR-8 (top panel) and PEA1 (bottom panel) cells transfected with control luciferase (Luc) or ZC3H18 siRNAs were harvested 48 h after transfection and processed for ChIP to detect DNMT1 on the BRCA1 promoter. c and d OVCAR-8 (c) and PEA1 (d) cells were transfected with control (Luc) or ZC3H18 siRNAs and treated with vehicle or 5-aza-2′-deoxycytidine (5 μM) for 3 days. BRCA1 mRNA (top panel) and ZC3H18 mRNA (bottom panel) levels were analyzed by qRT-PCR. The mRNA levels are normalized to GAPDH mRNA levels as the internal control. Data are means ± SEM from three independent experiments in bd. *p < 0.05, **p < 0.01, ***p < 0.001, unpaired Student’s t-test