. 2019 Sep 18;8(3):157. doi: 10.3390/pathogens8030157

Table 1.

Comparison of the short-read Illumina and hybrid Illumina/PacBio assembly of various trypanosomatid species showing output length and sequence identity (%).

	Coding Region		Non-Coding Region		Overall
	Size (bp)	% Identity	Size (bp)	% Identity	Size (bp)	% Identity
L. aethiopica (Illumina)	16 210	100	304	100	17 264	100
L. aethiopica (Hybrid)	16 210	100	1552	100	18 571	100
L. amazonensis (Illumina)	16 381	100	527	99.7	17 941	100
L. amazonensis (Hybrid)	16 381	100	4621	99.7	23 616	100
L. braziliensis (Illumina)	16 232	100	1121	98.5	18 118	99.9
L. braziliensis (Hybrid)	16 232	100	5745	98.5	23 012	99.9
L. guyanensis (Illumina)	16 235	100	1607	100	18 753	100
L. guyanensis (Hybrid)	16 235	100	3694	100	20 986	100
L. infantum (Illumina)	16 277	100	628	99.5	18 287	100
L. infantum (Hybrid)	16 277	100	1280	99.5	18 637	100
L. mexicana (Illumina)	16 472	100	736	99.7	17 946	100
L. mexicana (Hybrid)	16 472	100	1606	99.7	18 696	100
L. tropica (Illumina)	16 229	100	1582	97	18 800	99.5
L. tropica (Hybrid)	16 229	100	1644	97	19 020	99.5
T. brucei rhodesiense (Illumina)	14 905	100	2785	97	18 200	99.5
T. brucei rhodesiense (Hybrid)	14 905	100	3131	97	18 583	99.5