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. 2019 Oct 12;20:733. doi: 10.1186/s12864-019-6145-8

Table 3.

Concordance of the WGS serotyping method and other serotyping methods

Serotype* Concordance: SAST and WGS Concordance: rt-PCR and WGS
Total Isolates No. of Concordant Isolates Percent Total Isolates No. of Concordant Isolates Percent
a 67 67 100.0 64 64 100.0
b 49 49 100.0 46 46 100.0
c 9 9 100.0 9 9 100.0
d 8 8 100.0 8 8 100.0
e 131 131 100.0 122 122 100.0
f 131 131 100.0 131 131 100.0
NT 293 292 99.7 116 116 100.0
Total 688 687 99.9 496 496 100.0

Serotype* defined by SAST method. The concordance data is reported as the number and percent of isolates. Only one discordant isolate was identified