Table 4.
Enriched Gene Ontology terms and KEGG pathway identified for proteins with reduced expression in C-AME (< 0.5-fold) compared to F-AME
Enrichment scores | Biological pathways | Proteins (UniProt Accession no.) | p | |
---|---|---|---|---|
(A) Enriched GO terms (DAVID) | ||||
1 | 15.19 | GO:0098609~cell-cell adhesion | P07355, P62820, Q8WUF5, P61026, P31947, P06733, P04075, Q9H444, P43487, Q9C0C2, P30041, Q15056, P46109, P31949, Q15907, Q99497, Q9UJU6, O60437, P00338, Q92817, P31939, Q16643, P20810, Q9NYL9, P0DMV9, Q16658, P63244, Q14847, Q8NC51, Q14247 | 1.3E-12* |
2 | 6.45 | GO:0043488~regulation of mRNA stability | P27695, P25788, P25789, P25786, P0DMV9, P20618, P28070, O14818, Q92945, P60900, P49721, P04792, P49720, Q8NC51, P28066 | 2E-6* |
3 | 6.45 | GO:0051603~proteolysis involved in cellular protein catabolic process | P20618, P25788, P25789, P25786, P28070, O14818, P07858, P60900, P49721, P49720 | 1E-4* |
3 | 4.23 | GO:0006096~glycolytic process | P60174, P04406, P00558, P04075, P00338, P06733, P06744 | 0.026* |
(B) KEGG pathways (DAVID) | ||||
1 | 6.45 | hsa03050:Proteasome | P20618, P25788, P25789, P25786, P28070, O14818, P60900, P49721, P49720, P28066 | 3.6E-4* |
2 | 4.23 | hsa01130:Biosynthesis of antibiotics | P40925, P60174, P04406, P37837, P06733, P00338, P04075, Q03154, P06744, P31939, P11766, P54687, P29401, P14324, P00558, P14550, P21399 | 0.014* |
GO = gene ontology, KEGG = kyoto encyclopedia of genes and genomes, F-AME = fresh human amnion extract, C-AME = cryopreserved human amnion extract, DAVID = database for annotation, visualization and integrated discovery
The biological events were ranked using enrichment scores. *Adjusted Benjamini p < 0.05 represents statistical significance