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. 2019 Sep 10;28(11):2878–2891.e5. doi: 10.1016/j.celrep.2019.08.024
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

CD4 (RM4-5) BD Biosciences Cat#560782; RRID:AB_1937315
PD-1 (J43) Thermo Fisher Cat#11-9985-82; RRID:AB_465472
Ki67 (SolA15) Thermo Fisher Cat#12-5698-80; RRID:AB_11149672
CD45 (30-F11) BD Biosciences Cat#561487; RRID:AB_561487
CD45.1 (A20) Biolegend Cat#110716; RRID:AB_10660302
CD45.1 (A20) Thermo Fisher Cat#25-0453-81; RRID:AB_469628
CD45.2 (clone 104) BD Biosciences Cat#562130; RRID:AB_10896649
FoxP3 (FJK-15 s) Thermo Fisher Cat#11-5773-82; RRID:AB_465243
CXCR5 (2G8) BD Biosciences Cat#551960; RRID:AB_394301
CD19 (ID3) Thermo Fisher Cat#25-0193-82; RRID:AB_657663
CD19 (ID3) BD Biosciences Cat#561113; RRID:AB_10563071
B220 (RA3-6B2) Thermo Fisher Cat#12-0452-82; RRID:AB_465671
B220 (RA3-6B2) Biolegend Cat#103236; RRID:AB_893354
Fas (Jo2) BD Biosciences Cat#563647; RRID:AB_2738346
GL7 (GL7) BD Biosciences Cat#553666; RRID:AB_394981
CD86 (GL1) Biolegend Cat#105014; RRID:AB_439783
CXCR4 (L276F12) Biolegend Cat#146509; RRID:AB_2562786
CD138 (281-2) Biolegend Cat#142503; RRID:AB_10915989
CD138 (281-2) BD Biosciences Cat#562610; RRID:AB_11153126
IgD (11-26c.2a) Biolegend Cat#405711; RRID:AB_1937245
IgG1 (A85-1) BD Biosciences Cat#550331; RRID:AB_2296342
IgM (II/41) Thermo Fisher Cat#25-5790; RRID:AB_469655
PD-L2/CD273 (122) Thermo Fisher Cat#11-9972-82; RRID:AB_465462
CD80 (16-10A1) Biolegend Cat#104713; RRID:AB_1240733
Tbet (4B10) Thermo Fisher Cat#50-5825-80; RRID:AB_10597459
GATA3 (16E10A23) Biolegend Cat#653809; RRID:AB_2563216
BCL6 (K112-91) BD Biosciences Cat#562198; RRID:AB_11153136
IL-17a (TC11-18H10) BD Biosciences Cat#560220; RRID:AB_1645194
CD38 (90) Biolegend Cat#102727 RRID:AB_2616967
Gr-1 (RB6-8C5) Biolegend Cat#108437 RRID:AB_2562214
F4/80 (BM8) Biolegend Cat#123135 RRID:AB_2562622
IL-21R (2A9) Bioxcell Cat#BE0258; RRID:AB_2687737

Chemicals, Peptides, and Recombinant Proteins

Ovalbumin (OVA) Hyglos Cat#321001
NP-chicken gamma globulin (NP-CGG) (Ratio 20) Biosearch Technologies Cat#N-5055C-1
NP-Ovalbumin (NP-OVA) (Ratio 20 or 17) Biosearch Technologies Cat# N-5051-10-BS
Aluminum potassium sulfate dodecahydrate (Alum) Sigma Cat#31242-500G-D
Strepavidin APC BD Biosciences Cat#554067
Strepavidin APC-Cy7 Biolegend Cat#405208
NP-PE (Ratio 28) Biosearch Technologies Cat#N-5070-1
7-amino-actinomycin D (7-AAD) Biolegend Cat#420403
AnnexinV-PE Biolegend Cat#640908
Sodium Hydroxide Fisher Cat# S318-1
Sheep Red Blood Cells (SRBCs) Labor Dr. Merck, Ochsenhausen Cat#E-400

Critical Commercial Assays

Thermo Fisher FoxP3 Transcription Factor Staining Buffer Set Fisher Cat#00-5523-00
RNA Isolation Kit QIAGEN Cat#GR8RNA
Omniscript RT Kit 200 QIAGEN Cat#205113
qRT-PCR Kit (Rox) Bio & SELL Cat#BS76.520.5000
Chromatrap® pro G ChIP spin column kit Direct 7Bioscience Cat#500190
Bio-Plex Pro Mouse Cytokine IL-21 Biorad Cat#171GA003M

Experimental Models: Cell Lines

Jurkat T cells ATCC ATCC-TIB152

Experimental Models: Organisms/Strains

Nr2f6-deficient mice (C57BL/6) Hermann-Kleiter et al., 2008 N/A
Wild-type, C57BL/6N Charles River Strain Code#027
Nr2f6+/+ OT-II, C57BL/6-Tg(TcraTcrb) 425Cbn/Crl Charles River Strain Code#643
Nr2f6−/− OT-II In House N/A
B6.SJL-Ptprca Pepcb/BoyJ (CD45.1) Jackson Stock# 002014; RRID:IMSR_JAX:002014
B6.SJL x C57BL/6 (CD45.1/CD45.2) In House N/A

Oligonucleotides

See Table S1 for EMSA Oligonucleotide sequences This paper N/A
CNS +23 F-ACTTCCACTGGTCAGGGTCT Synthesized by Eurofins N/A
CNS +23 R-AGCAATGGTCAATTGTTGTGGG Synthesized by Eurofins N/A
CNS −36 F-CTCCAGTGACCCCATTCTCC Synthesized by Eurofins N/A
CNS −36 R-TTGCTCTCGCCAAGTGGAAA Synthesized by Eurofins N/A
Prom −1- −2.2kb F-CAGCAGCGTCCCTTACAGAA Synthesized by Eurofins N/A
Prom −1- −2.2kb R-CTTCTGCAGGAGATGAGCATT Synthesized by Eurofins N/A
qRT-PCR primers Il21 Applied Biosystem Cat#Mm00517640_m1
qRT-PCR primers Il4 Applied Biosystem Cat#Mm00445259_m1
qRT-PCR primers Il2 Applied Biosystem Cat#Mm00434256_m1

Recombinant DNA

Nr2f6-pEFNeos construct Hermann-Kleiter et al., 2008 N/A

Software and Algorithms

FlowJo 10 TreeStar RRID:SCR_008520
Fiji (ImageJ) N/A http://fiji.sc; RRID:SCR_002285
Prism 7 Graphpad https://www.graphpad.com/; RRID:SCR_002798
R N/A https://www.r-project.org/