Table 5.
SNPs associated with potassium content (K; meq/100 g), sodium content (Na;meq/100 g), and -amino nitrogen content (N; meq/100 g) for the mean phenotype of (elite exotic) progeny
| SNP | Trait | Model | Chr | Position | %var | Favorable.exotic |
|---|---|---|---|---|---|---|
| SNP_10753 | Na | A | 9 | 105.93 | 0.11 | Yes |
| SNP_06641 | Na | AD | 6 | 31.43 | 0.13 | No |
| SNP_07975 | K | A | 7 | 66.69 | 0.18 | No |
| SNP_07975 | K | AD | 7 | 66.69 | 0.18 | No |
| SNP_06319 | N | A | 5 | 64.98 | 0.52 | No |
| SNP_00322 | Na | A | 1 | 46.05 | 0.20 | No |
| SNP_06273 | Na | A | 5 | 56.20 | 0.05 | No |
| SNP_01689 | Na | A | 2 | 22.23 | 0.02 | Yes |
| SNP_05508 | Na | A | 5 | 30.14 | 0.07 | No |
| SNP_00116 | Na | A | 1 | 21.86 | 0.08 | Yes |
| SNP_02804 | Na | A | 3 | 50.78 | 0.04 | Yes |
| SNP_00350 | Na | A | 1 | 51.00 | 0.04 | Yes |
| SNP_09633 | Na | A | 8 | 95.03 | 0.06 | Yes |
| SNP_09271 | Na | A | 8 | 67.17 | 0.04 | No |
| SNP_09818 | Na | A | 9 | 10.12 | 0.06 | Yes |
| SNP_09973 | Na | A | 9 | 36.71 | 0.05 | Yes |
| SNP_06344 | N | A | 5 | 68.13 | 0.18 | Yes |
These SNPs are detected in association studies with an additive model (A) and an additive and dominance model (AD), and selected with the eBIC criterion. Their position on chromosome, the proportion of variance they explained in the multi SNPs model selected by eBIC (%var), and information about the favorable or unfavorable effect of the exotic allele are also given