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. 2019 May 31;127(5):057012. doi: 10.1289/EHP4522

Table 6.

Associations between PM exposure and gene expression levels in 16-y-old children of the BAMSE cohort (n=244).

Chr Gene ProbeID LogFC p-Value
Concurrent PM10
 6 NOTCH4 TC6_mcf_hap5000165.hg.1 0.05 9.52E-05
 6 NOTCH4 TC6_apd_hap1000098.hg.1 0.06 9.73E-05
 6 NOTCH4 TC6_mann_hap4000155.hg.1 0.06 9.98E-05
 6 NOTCH4 TC6_cox_hap2000190.hg.1 0.05 1.03E-04
 6 NOTCH4 TC6_ssto_hap7000159.hg.1 0.05 1.10E-04
 6 NOTCH4 TC06001564.hg.1 0.05 1.31E-04
 6 NOTCH4 TC6_qbl_hap6000179.hg.1 0.05 1.42E-04
 17 USP43 TC17000146.hg.1 0.05 4.98E-04
 4 FAM13A TC04001380.hg.1 0.01 2.14E-01
 3 SRPRB TC03000725.hg.1 0.01 2.89E-01
Concurrent PM2.5
 7 C7orf50 TC07001077.hg.1 0.02 0.03
 19 PSG5 TC19001582.hg.1 0.02 0.06
 1 VANGL2 TC01001369.hg.1 0.02 0.08
 1 ZNF695 TC01006392.hg.1 0.01 0.08
 8 COL22A1 TC08001675.hg.1 0.02 0.10
 8 PLAT TC08001175.hg.1 0.02 0.16
 19 MRI1 TC19000239.hg.1 0.01 0.17
 2 CAPN10 TC02005015.hg.1 0.01 0.21
 10 MKX TC10001133.hg.1 0.01 0.29
 13 TMCO3 TC13000425.hg.1 0.01 0.30
 7 PLXNA4 TC07001877.hg.1 0.01 0.33
 19 ZNF606 TC19001910.hg.1 0.0003 0.96

Note: Results presented per 5.6μg/m3 increase in PM10 and 2μg/m3 increase in PM2.5 exposure for genes annotated to FDR significant CpGs in the discovery PM10 and PM2.5 EWAS. LogFC=logarithm fold -change (one unit of the logFCs translates to a two-fold change in expression). Adjusted for sex, maternal smoking during pregnancy, active smoking at the time of biosampling, age at biosampling, municipality at birth, doctor’s diagnosis of asthma, and cell composition.