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. 2019 Jul 10;13(11):2764–2777. doi: 10.1038/s41396-019-0471-3

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Horizontal gene transfers of two different rhodopsins. a Phylogenetic tree (RAxML, 100 bootstraps) of different rhodopsin types. See Fig. S12 for details of closely related proteo- and xantho-like rhodopsins of Methylophilaceae. b Arrangement and protein similarity of rhodopsins and the retinal biosynthesis gene cluster in “Ca. Methylopumilus spp.”, “Ca. Methylosemipumilus turicensis”, marine OM43, and other freshwater microbes with closely related rhodopsin types