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. 2019 Oct 3;4(19):e130848. doi: 10.1172/jci.insight.130848

Figure 5. Number of SNPs identified via WGS.

Figure 5

MacConkey agar isolates from patient/donor pair 9 underwent WGS and core genome alignment analysis with Parsnp. Data are ordered according to their similarity with donor isolate 5D. Murine clbB+ isolate NC101 is shown for comparison. D, donor isolates; P, patient isolates. Five donor (D) and 5 patient post-FMT (P) isolates are shown. Five isolates from the patient pre-FMT were also sequenced but were too divergent to be aligned alongside the E. coli isolates, as the pre-FMT isolates were all Klebsiella or Morganella species.