Appendix 1—table 5. Summary statistics and BUSCO results from the genome assembly process of Drosophila pseudoobscura.
| Canu + Racon (3x) | Canu + Racon (3x) + Pilon (1x) | Canu + Racon (3x) + Pilon (2x) | Final Hi-C scaffolded Dpse_1.0 | |
|---|---|---|---|---|
| N50 | 5,996,964 | 5,975,358 | 5,971,646 | * |
| Max Contig | 20,387,169 | 20,334,965 | 20,319,488 | * |
| Assembly Size | 194,744,540 | 194,172,171 | 193,935,436 | 193,980,066 |
| Number of Contigs | 481 | 481 | 481 | * |
| Complete BUSCOs | 974 | 1052 | 1057 | 1055 |
| Complete Single Copy BUSCOs | 968 | 1043 | 1048 | 1048 |
| Duplicated | 6 | 9 | 9 | 7 |
| Fragmented | 59 | 3 | 2 | 3 |
| Missing | 33 | 11 | 7 | 8 |
| % BUSCOs complete | 91.4% | 98.6% | 99.2% | 99.0% |