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. 2019 Oct 16;9:14882. doi: 10.1038/s41598-019-51284-9

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© The Author(s) 2019

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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High Level Architecture Diagram of ScalaDBG. This shows the graph construction with only two different k values, k1 and k2 with $k 1 < k 2$ . The graph G_k2 is “patched” with contigs from G_k1 to generate the combined graph G_k1–k2, which gives the final set of contigs. Different modules in ScalaDBG are highlighted by different colors.