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. 2019 Jun 13;94:1–124. doi: 10.1016/j.simyco.2019.05.001

Table 6.

DNA barcodes of accepted Neosetophoma spp.

Species Isolates1 GenBank accession numbers2
References
ITS rpb2 tef1 tub2
Neosetophoma aseptata CBS 145363T MK539953 MK540084 Present study
Nph. clematidis MFLUCC 13-0734T KP744450 Liu et al. (2015)
Nph. garethjonesii MFLUCC 14-0528T KY496758 KY514402a Tibpromma et al. (2017)
Nph. guiyangensis GZCC 18-0111T MH018134 Hyde et al. (2018)
Nph. iranianum IBRC-M 30176T MF684861 Karunarathna et al. (2017)
Nph. italica MFLUCC 13-0388T KP711356 Liu et al. (2015)
Nph. lunariae CBS 141409T KX306763 Hernández-Restrepo et al. (2016a)
Nph. phragmitis CBS 145364T MK539954 MK540085 MK540148b Present study
Nph. poaceicola MFLUCC 16-0886T KY568986 Thambugala et al. (2017)
Nph. rosae MFLUCC 15-1073T MG828925 MG829218a Wanasinghe et al. (2018)
Nph. rosarum MFLUCC 17-0308T MG828927 Wanasinghe et al. (2018)
Nph. rosigena MFLUCC 17-0768T MG828928 Wanasinghe et al. (2018)
Nph. samarorum CBS 138.96ET KF251160 KF252168 KF253119b KF252655 Quaedvlieg et al. (2013)
Nph. sambuci CBS 145365T MK539955 MK540086 MK540149b Present study
Nph. shoemakeri MFLUCC 17-0780 MG844346 MG844352a Hyde et al. (2018)
Nph. xingrensis GZCC 18-0110T MH018135 Hyde et al. (2018)
1

CBS: Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; GZCC: Guizhou Academy of Agricultural Sciences Culture Collection, Guiyang, China; IBRC: Herbarium of the Plant bank, Iranian Biological Resource Center, Karaj, Iran; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Ria, Thailand. T and ET indicate ex-type and ex-epitype strains, respectively.

2

ITS: internal transcribed spacers and intervening 5.8S nrDNA; rpb2: partial DNA-directed RNA polymerase II second largest subunit gene; tef1: partial translation elongation factor 1-alpha gene; tub2: partial β-tubulin gene. a and b in tef1 column indicate the primers used for sequencing: a: EF1-983F / EF1-2218R; b: EF1-728F / EF-2.