Table 5. Variable sites (%) and nucleotide sequence identities (%) of citrus tatter leaf virus and apple stem grooving virus isolated from citrus and citrus relatives (n = 28).
| 5'-Untranslated Region and Partial Polyprotein (1–5,640 nt)* |
Variable Region I (1,630–1,746 nt) |
Variable Region II (4,783–5,640 nt) |
Coat Protein and 3'-Untranslated Region (5,641–6,495 nt) |
Movement Protein (4,788–5,750 nt) |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Variable Sites (Variable/Total) |
Minimum NSI$ |
NSI Mean ± SD |
Variable Sites (Variable/Total) |
Minimum NSI |
NSI Mean ± SD |
Variable Sites (Variable/Total) |
Minimum NSI |
NSH Mean ± SD |
Variable Sites (Variable/Total) |
Minimum NSI |
NSI Mean ± SD |
Variable Sites (Variable/Total) |
Minimum NSI |
NSI Mean ± SD |
| 39.98 (2255/5640) |
79.30 | 84.54 ± 6.66 | 94.87 (111/117) |
34.18 | 54.72 ± 21.80 | 35.08 (301/858) |
82.05 | 87.87 ± 5.25 | 23.63 (202/855) |
89.60 | 92.78 ± 2.92 | 32.81 (316/963) |
83.90 | 88.80 ± 4.77 |
*Nucleotide position is based on reference genome of citrus tatter leaf virus isolate TL100 (NCBI GenBank Accession No. MH108975)
$NSI: Nucleotide Sequence Identity