Table 6. Variable sites (%) and nucleotide sequence identities (%) of the segmented coat protein and 3'-untranslated region of citrus tatter leaf and apple stem grooving virus isolated from citrus and citrus relatives (n = 28).
| Position* (nt) | Variable Sites (Variable/Total) |
Minimum NSI$ |
NSI Mean ± SD |
|---|---|---|---|
| 5641–5840 | 22.50 (45/200) |
86.00 | 94.36 ± 2.71 |
| 5841–6040 | 30.00 (60/200) |
84.00 | 90.03 ± 4.76 |
| 6041–6240 | 25.50 (51/200) |
87.00 | 91.98 ± 3.32 |
| 6241–6440 | 14.50 (29/200) |
92.50 | 95.41 ± 1.99 |
| 6441–6495 | 30.91 (17/55) |
78.18 | 90.49 ± 7.25 |
*Nucleotide position is based on reference genome of citrus tatter leaf virus isolate TL100 (NCBI GenBank Accession No. MH108975)
$NSI: Nucleotide Sequence Identity