Table 4. Effect of ubiquinol:ferricytochrome c reductase reaction on growth.
Id | Name | Model | Upper bound | Actual flux | Growth |
---|---|---|---|---|---|
r_0439 | ubiquinol:ferricytochrome c reductase | Control | 3.536 | 3.465 | 0.0704 |
Treated | 2.582 | 2.582 | 0.0591 | ||
Control | 2.582 | 2.582 | 0.0597 | ||
Treated | 3.536 | 3.536 | 0.0672 | ||
Treated | 10.000 | 4.534 | 0.0688 |
The first two data rows show the upper bounds set for the reaction from the RNA-Seq data for the control and treated models, respectively, as well as the resulting actual fluxes and growth rates. The other three rows show the effect in the actual flux and on growth of modifying the upper bound values. All fluxes are in mmol/(gDW*hour).