TABLE 1.
Summary of complete genome sequences
| Characteristic | Data for strain: |
|||
|---|---|---|---|---|
| A9 | Hg3 | ViU2a | ViU22 | |
| GenBank accession no. | CP031421 | CP031422 | CP031338 | CP031423 |
| Raw data accession no. (Illumina) | SRR8416123 | SRR8416223 | SRR8416225 | SRR8417352 |
| No. of reads (Illumina) | 18,500,154 | 19,895,949 | 15,648,367 | 13,317,740 |
| Raw data accession no. (PacBio) | SRR8416122 | SRR8416222 | SRR8416224 | SRR8417351 |
| No. of reads (PacBio) | 144,950 | 154,761 | 172,715 | 164,482 |
| Mean read length (bp) (PacBio) | 8,474 | 8,380 | 7,755 | 8,270 |
| Genome length (Mb) | 2.99 | 3.9 | 3.8 | 3.6 |
| G+C content (%) | 69 | 68.2 | 68.3 | 70.8 |
| No. of protein-coding genes | 2,880 | 3,764 | 3,708 | 3,297 |
| No. of tRNA genes | 50 | 51 | 54 | 52 |
| No. of rRNA genes | 6 | 6 | 6 | 6 |
| No. of TCSs | 62 | 70 | 75 | 55 |
| No. of TFs | 156 | 274 | 280 | 191 |