Online-only Table 4.

Predicted RNA-editing sites in Scaffold 1 of the C. sinensis var. assamica mt genome.

No.	Gene	Nucleotide Position	AA Pos	Effect	Score*
1	matR	32	11	TCC (S) => TTC (F)	0.62
2	matR	236	79	TCC (S) => TTC (F)	0.62
3	matR	326	109	CCA (P) => CTA (L)	1
4	matR	917	306	TCA (S) => TTA (L)	1
5	matR	1442	481	GCC (A) => GTC (V)	0.62
6	matR	1667	556	TCC (S) => TTC (F)	1
7	matR	1688	563	CCT (P) => CTT (L)	1
8	matR	1708	570	CGC (R) => TGC (C)	1
9	matR	1744	582	CAC (H) => TAC (Y)	1
10	matR	1775	592	CCG (P) => CTG (L)	1
11	matR	1814	605	CCA (P) => CTA (L)	0.88
12	matR	1832	611	TCA (S) => TTA (L)	0.88
13	ccmFn	38	13	CCG (P) => CTG (L)	1
14	ccmFn	98	33	CCT (P) => CTT (L)	1
15	ccmFn	137	46	TCG (S) => TTG (L)	1
16	ccmFn	142	48	CGT (R) => TGT (C)	1
17	ccmFn	151	51	CCT (P) => TCT (S)	0.83
18	ccmFn	248	83	TCA (S) => TTA (L)	1
19	ccmFn	256	86	CGG (R) => TGG (W)	1
20	ccmFn	283	95	CTT (L) => TTT (F)	0.83
21	ccmFn	334	112	CAT (H) => TAT (Y)	0.67
22	ccmFn	356	119	TCC (S) => TTC (F)	0.67
23	ccmFn	391	131	CCT (P) => TCT (S)	1
24	ccmFn	478	160	CGT (R) => TGT (C)	0.83
25	ccmFn	706	236	CCT (P) => TTT (F)	0.67
26	ccmFn	707	236	CCT (P) => TTT (F)	0.67
27	ccmFn	716	239	TCA (S) => TTA (L)	0.83
28	ccmFn	754	252	CGT (R) => TGT (C)	1
29	ccmFn	776	259	TCA (S) => TTA (L)	1
30	ccmFn	788	263	CCA (P) => CTA (L)	1
31	ccmFn	803	268	TCA (S) => TTA (L)	1
32	ccmFn	893	298	GCG (A) => GTG (V)	1
33	ccmFn	952	318	CGC (R) => TGC (C)	1
34	ccmFn	1270	424	CGG (R) => TGG (W)	1
35	ccmFn	1298	433	CCA (P) => CTA (L)	1
36	ccmFn	1315	439	CAT (H) => TAT (Y)	1
37	ccmFn	1330	444	CGG (R) => TGG (W)	1
38	ccmFn	1348	450	CGG (R) => TGG (W)	1
39	ccmFn	1381	461	CGG (R) => TGG (W)	1
40	ccmFn	1399	467	CGT (R) => TGT (C)	1
41	ccmFn	1442	481	TCG (S) => TTG (L)	1
42	ccmFn	1462	488	CTT (L) => TTT (F)	1
43	ccmFn	1466	489	CCA (P) => CTA (L)	1
44	ccmFn	1478	493	TCA (S) => TTA (L)	1
45	ccmFn	1487	496	TCT (S) => TTT (F)	1
46	ccmFn	1513	505	CCC (P) => TCC (S)	1
47	ccmFn	1561	521	CGG (R) => TGG (W)	0.67
48	nad5	155	52	CCG (P) => CTG (L)	1
49	nad5	238	80	CCG (P) => TCG (S)	0.8
50	nad5	269	90	TCC (S) => TTC (F)	0.7
51	nad5	355	119	CCT (P) => TTT (F)	1
52	nad5	356	119	CCT (P) => TTT (F)	1
53	nad5	371	124	CCA (P) => CTA (L)	0.9
54	nad5	395	132	TCT (S) => TTT (F)	0.9
55	nad5	503	168	CCT (P) => CTT (L)	1
56	nad5	536	179	CCT (P) => CTT (L)	1
57	nad5	626	209	TCT (S) => TTT (F)	0.9
58	nad5	628	210	CGC (R) => TGC (C)	0.9
59	nad5	673	225	CTT (L) => TTT (F)	0.9
60	nad5	710	237	TCG (S) => TTG (L)	1
61	nad5	722	241	TCA (S) => TTA (L)	1
62	nad5	832	278	CCA (P) => TCA (S)	0.9
63	nad5	872	291	ACG (T) => ATG (M)	1
64	nad5	1307	436	TCA (S) => TTA (L)	1
65	nad4	29	10	TCC (S) => TTC (F)	0.67
66	nad4	74	25	ACT (T) => ATT (I)	0.89
67	nad4	77	26	CCT (P) => CTT (L)	0.78
68	nad4	107	36	CCG (P) => CTG (L)	1
69	nad4	154	52	CCC (P) => TCC (S)	1
70	nad4	158	53	CCT (P) => CTT (L)	1
71	nad4	166	56	CGG (R) => TGG (W)	1
72	nad4	197	66	TCT (S) => TTT (F)	1
73	nad4	362	121	ACA (T) => ATA (I)	0.89
74	nad4	368	123	TCT (S) => TTT (F)	1
75	nad4	376	126	CGT (R) => TGT (C)	0.78
76	nad4	403	135	CGC (R) => TGC (C)	1
77	nad4	416	139	CCT (P) => CTT (L)	0.89
78	nad4	433	145	CTT (L) => TTT (F)	1
79	nad4	436	146	CCC (P) => TTC (F)	0.89
80	nad4	437	146	CCC (P) => TTC (F)	0.89
81	nad4	449	150	CCA (P) => CTA (L)	1
82	nad4	547	183	CTC (L) => TTC (F)	0.67
83	nad4	1336	446	CAC (H) => TAC (Y)	1
84	nad4	1352	451	CCG (P) => CTG (L)	1
85	nad4	1357	453	CGC (R) => TGC (C)	1
86	atp6	37	13	CCA (P) => TCA (S)	0.75
87	atp6	116	39	TCA (S) => TTA (L)	1
88	atp6	167	56	CCG (P) => CTG (L)	1
89	atp6	173	58	CCG (P) => CTG (L)	1
90	atp6	224	75	TCC (S) => TTC (F)	1
91	atp6	229	77	CGC (R) => TGC (C)	0.75
92	atp6	236	79	TCG (S) => TTG (L)	0.67
93	atp6	254	85	TCG (S) => TTG (L)	1
94	atp6	262	88	CGT (R) => TGT (C)	1
95	atp6	269	90	CCC (P) => CTC (L)	1
96	atp6	401	134	TCA (S) => TTA (L)	1
97	atp6	460	154	CCT (P) => TCT (S)	1
98	atp6	463	155	CAT (H) => TAT (Y)	1
99	atp6	485	162	CCA (P) => CTA (L)	1
100	atp6	527	176	TCA (S) => TTA (L)	1
101	atp6	548	183	TCC (S) => TTC (F)	1
102	atp6	635	212	CCG (P) => CTG (L)	1
103	atp6	656	219	TCA (S) => TTA (L)	1
104	atp6	664	222	CAT (H) => TAT (Y)	1
105	atp6	671	224	TCT (S) => TTT (F)	1
106	atp6	680	227	TCA (S) => TTA (L)	1
107	atp6	707	236	ACA (T) => ATA (I)	0.92
108	atp6	718	240	CAA (Q) => TAA (X)	1
109	mttB	58	20	CAT (H) => TAT (Y)	0.88
110	mttB	83	28	TCG (S) => TTG (L)	0.88
111	mttB	91	31	CCA (P) => TCA (S)	1
112	mttB	127	43	CGT (R) => TGT (C)	0.88
113	mttB	134	45	CCA (P) => CTA (L)	0.62
114	mttB	164	55	TCC (S) => TTC (F)	0.75
115	mttB	196	66	CCG (P) => TCG (S)	1
116	mttB	253	85	CGT (R) => TGT (C)	0.62
117	mttB	290	97	TCT (S) => TTT (F)	1
118	mttB	299	100	TCG (S) => TTG (L)	0.75
119	ccmB	28	10	CAT (H) => TAT (Y)	0.89
120	ccmB	43	15	CCC (P) => TCC (S)	0.67
121	ccmB	71	24	CCA (P) => CTA (L)	1
122	ccmB	80	27	TCG (S) => TTG (L)	1
123	ccmB	128	43	TCA (S) => TTA (L)	1
124	ccmB	137	46	TCC (S) => TTC (F)	1
125	ccmB	149	50	CCG (P) => CTG (L)	1
126	ccmB	154	52	CGG (R) => TGG (W)	1
127	ccmB	160	54	CCT (P) => TCT (S)	0.67
128	ccmB	164	55	CCG (P) =>=> CTG (L)	0.89
129	ccmB	172	58	CCT (P) => TCT (S)	0.89
130	ccmB	179	60	CCT (P) => CTT (L)	1
131	ccmB	193	65	CCT (P) => TTT (F)	0.89
132	ccmB	194	65	CCT (P) => TTT (F)	0.89
133	ccmB	286	96	CGG (R) => TGG (W)	1
134	ccmB	304	102	CGT (R) => TGT (C)	0.78
135	ccmB	313	105	CGT (R) => TGT (C)	0.89
136	ccmB	338	113	CCG (P) => CTG (L)	1
137	ccmB	367	123	CGG (R) => TGG (W)	0.78
138	ccmB	424	142	CGT (R) => TGT (C)	0.89
139	ccmB	428	143	TCG (S) => TTG (L)	1
140	ccmB	467	156	TCG (S) => TTG (L)	0.89
141	ccmB	476	159	CCA (P) => CTA (L)	0.89
142	ccmB	485	162	TCA (S) => TTA (L)	1
143	ccmB	494	165	TCA (S) => TTA (L)	1
144	ccmB	503	168	CCA (P) => CTA (L)	1
145	ccmB	512	171	TCT (S) => TTT (F)	1
146	ccmB	514	172	CGT (R) => TGT (C)	1
147	ccmB	551	184	TCA (S) => TTA (L)	1
148	ccmB	554	185	TCG (S) => TTG (L)	0.89
149	ccmB	566	189	TCC (S) => TTC (F)	0.78
150	ccmB	569	190	TCT (S) => TTT (F)	0.78
151	ccmB	572	191	CCG (P) => CTG (L)	1
152	ccmB	596	199	TCG (S) => TTG (L)	0.89
153	rpl10	101	34	TCG (S) => TTG (L)	0.83
154	rpl10	239	80	TCG (S) => TTG (L)	0.83
155	rpl10	314	105	TCA (S) => TTA (L)	0.83
156	rps7	152	51	CCA (P) => CTA (L)	0.75
157	rps7	343	115	CAC (H) => TAC (Y)	0.62
158	rps7	368	123	TCA (S) => TTA (L)	0.88
159	atp1	1039	347	CCC (P) => TCC (S)	1
160	atp1	1064	355	TCG (S) => TTG (L)	1
161	atp1	1178	393	TCA (S) => TTA (L)	0.9
162	atp1	1216	406	CTT (L) => TTT (F)	1
163	atp1	1292	431	CCG (P) => CTG (L)	0.8
164	atp1	1415	472	CCA (P) => CTA (L)	1
165	atp1	1490	497	CCA (P) => CTA (L)	0.9
166	atp9	20	7	TCA (S) => TTA (L)	1
167	atp9	50	17	TCA (S) => TTA (L)	1
168	atp9	82	28	CTT (L) => TTT (F)	1
169	atp9	92	31	TCG (S) => TTG (L)	1
170	atp9	134	45	TCA (S) => TTA (L)	1
171	atp9	182	61	TCG (S) => TTG (L)	1
172	atp9	191	64	CCA (P) => CTA (L)	1
173	atp9	212	71	TCA (S) => TTA (L)	1
174	atp9	215	72	TCC (S) => TTC (F)	1
175	atp9	223	75	CGA (R) => TGA (X)	1
176	sdh3	67	23	CCC (P) => TCC (S)	1
177	sdh3	376	126	CTC (L) => TTC (F)	0.83
178	rpl16	79	27	CAG (Q) => TAG (X)	1
179	rpl16	227	76	ACT (T) => ATT (I)	1
180	rpl16	355	119	CTC (L) => TTC (F)	0.89
181	rpl16	524	175	CCA (P) => CTA (L)	1
182	rpl16	530	177	TCG (S) => TTG (L)	0.75
183	rps3	314	105	CCA (P) => CTA (L)	0.86
184	rps3	647	216	CCG (P) => CTG (L)	1
185	rps3	674	225	CCG (P) => CTG (L)	0.86
186	rps3	785	262	TCA (S) => TTA (L)	1
187	rps3	838	280	CGT (R) => TGT (C)	1
188	rps3	902	301	TCA (S) => TTA (L)	0.86
189	rps19	62	21	TCG (S) => TTG (L)	1
190	rps19	109	37	CCT (P) => TTT (F)	1
191	rps19	110	37	CCT (P) => TTT (F)	1
192	rpl2	215	72	CCA (P) => CTA (L)	0.75
193	rpl2	329	110	CCA (P) => CTA (L)	1
194	rpl2	494	165	GCG (A) => GTG (V)	0.67
195	rpl2	517	173	CTC (L) => TTC (F)	1
196	rpl2	550	184	CCC (P) => TCC (S)	1
197	atp8	47	16	TCA (S) => TTA (L)	1
198	atp8	58	20	CTC (L) => TTC (F)	1
199	atp8	452	151	CCA (P) => CTA (L)	0.75
200	cox3	289	97	CTT (L) => TTT (F)	0.92
201	cox3	304	102	CGG (R) => TGG (W)	1
202	cox3	311	104	TCT (S) => TTT (F)	0.92
203	cox3	314	105	TCT (S) => TTT (F)	0.92
204	cox3	419	140	CCC (P) => CTC (L)	1
205	cox3	422	141	CCT (P) => CTT (L)	0.92
206	cox3	512	171	TCA (S) => TTA (L)	0.75
207	cox3	653	218	TCG (S) => TTG (L)	1
208	cox3	754	252	CGG (R) => TGG (W)	0.92
209	cox3	764	255	CCA (P) => CTA (L)	0.92
210	sdh4	155	52	CCA (P) => CTA (L)	0.88
211	sdh4	203	68	CCA (P) => CTA (L)	0.75
212	sdh4	259	87	CAT (H) => TAT (Y)	0.88
213	cox1	155	52	TCT (S) => TTT (F)	1
214	cox1	167	56	TCT (S) => TTT (F)	1
215	cox1	265	89	CCA (P) => TCA (S)	1
216	cox1	356	119	TCA (S) => TTA (L)	1
217	cox1	365	122	TCT (S) => TTT (F)	1
218	cox1	428	143	TCC (S) => TTC (F)	1
219	cox1	464	155	TCA (S) => TTA (L)	1
220	cox1	503	168	CCA (P) => CTA (L)	1
221	cox1	581	194	TCT (S) => TTT (F)	1
222	cox1	628	210	CGG (R) => TGG (W)	1
223	cox1	659	220	CCC (P) => CTC (L)	1
224	cox1	674	225	TCC (S) => TTC (F)	1
225	cox1	758	253	ACA (T) => ATA (I)	1
226	cox1	773	258	TCT (S) => TTT (F)	1
227	cox1	950	317	TCC (S) => TTC (F)	1
228	cox1	1099	367	CAC (H) => TAC (Y)	1
229	cox1	1187	396	CCG (P) => CTG (L)	0.89
230	cox1	1318	440	CGT (R) => TGT (C)	0.78
231	cox1	1346	449	TCA (S) => TTA (L)	1
232	cox1	1402	468	CCA (P) => TCA (S)	1
233	cox1	1412	471	TCG (S) => TTG (L)	1
234	nad7	38	13	TCG (S) => TTG (L)	0.75
235	nad7	77	26	TCA (S) => TTA (L)	1
236	nad7	83	28	TCA (S) => TTA (L)	1
237	nad7	137	46	TCA (S) => TTA (L)	1
238	nad7	205	69	CAT (H) => TAT (Y)	1
239	nad7	212	71	TCA (S) => TTA (L)	1
240	nad7	277	93	CGT (R) => TGT (C)	1
241	nad7	296	99	TCA (S) => TTA (L)	0.88
242	nad7	305	102	TCA (S) => TTA (L)	1
243	nad7	344	115	TCA (S) => TTA (L)	1
244	nad7	494	165	TCC (S) => TTC (F)	1
245	nad7	539	180	TCA (S) => TTA (L)	0.88
246	nad7	812	271	TCA (S) => TTA (L)	0.88
247	nad7	859	287	CCT (P) => TCT (S)	0.88
248	nad7	943	315	CGT (R) => TGT (C)	1
249	nad7	965	322	TCT (S) => TTT (F)	1
250	nad7	989	330	TCT (S) => TTT (F)	1
251	nad7	1010	337	CCA (P) => CTA (L)	1
252	nad7	1052	351	TCT (S) => TTT (F)	1
253	nad9	428	143	TCC (S) => TTC (F)	0.73
254	nad9	506	169	TCT (S) => TTT (F)	0.75
255	nad9	527	176	CCA (P) => CTA (L)	0.92
256	nad9	581	194	TCG (S) => TTG (L)	0.92
257	nad9	604	202	CAT (H) => TAT (Y)	1
258	nad9	712	238	CCG (P) => TCG (S)	0.83
259	nad9	742	248	CGG (R) => TGG (W)	1
260	nad9	782	261	TCC (S) => TTC (F)	1
261	nad9	812	271	TCA (S) => TTA (L)	1
262	nad9	853	285	CTT (L) => TTT (F)	1
263	nad9	953	318	TCT (S) => TTT (F)	1
264	nad4L	11	4	TCT (S) => TTT (F)	1
265	nad4L	17	6	TCA (S) => TTA (L)	1
266	nad4L	25	9	CGG (R) => TGG (W)	1
267	nad4L	56	19	CCT (P) => CTT (L)	1
268	nad4L	65	22	TCA (S) => TTA (L)	1
269	nad4L	70	24	CCA (P) => TCA (S)	1
270	nad4L	80	27	TCA (S) => TTA (L)	1
271	nad4L	101	34	TCG (S) => TTG (L)	0.88
272	nad4L	128	43	TCG (S) => TTG (L)	1
273	nad4L	149	50	TCA (S) => TTA (L)	0.75
274	nad4L	158	53	TCA (S) => TTA (L)	0.88
275	nad4L	167	56	CCA (P) => CTA (L)	0.88
276	nad4L	200	67	TCA (S) => TTA (L)	1
277	nad4L	251	84	TCT (S) => TTT (F)	0.88
278	atp4	71	24	TCA (S) => TTA (L)	1
279	atp4	89	30	TCA (S) => TTA (L)	1
280	atp4	118	40	CGT (R) => TGT (C)	0.71
281	atp4	215	72	TCG (S) => TTG (L)	1
282	atp4	248	83	CCT (P) => CTT (L)	1
283	atp4	395	132	TCA (S) => TTA (L)	1
284	atp4	407	136	CCA (P) => CTA (L)	0.71
285	atp4	416	139	ACT (T) => ATT (I)	0.86
286	ccmC	76	26	CGG (R) => TGG (W)	0.78
287	ccmC	103	35	CAT (H) => TAT (Y)	1
288	ccmC	115	39	CGG (R) => TGG (W)	0.78
289	ccmC	133	45	CTT (L) => TTT (F)	0.67
290	ccmC	161	54	CCG (P) => CTG (L)	0.78
291	ccmC	179	60	GCG (A) => GTG (V)	0.78
292	ccmC	184	62	CGG (R) => TGG (W)	1
293	ccmC	299	100	TCT (S) => TTT (F)	1
294	ccmC	331	111	CGG (R) => TGG (W)	1
295	ccmC	395	132	TCG (S) => TTG (L)	1
296	ccmC	400	134	CTT (L) => TTT (F)	0.89
297	ccmC	421	141	CGT (R) => TGT (C)	0.78
298	ccmC	436	146	CCT (P) => TCT (S)	0.89
299	ccmC	446	149	CCG (P) => CTG (L)	0.78
300	ccmC	451	151	CCT (P) => TCT (S)	1
301	ccmC	458	153	TCA (S) => TTA (L)	0.78
302	ccmC	463	155	CGT (R) => TGT (C)	1
303	ccmC	467	156	GCT (A) => GTT (V)	0.78
304	ccmC	473	158	CCG (P) => CTG (L)	1
305	ccmC	497	166	TCT (S) => TTT (F)	1
306	ccmC	521	174	TCG (S) => TTG (L)	1
307	ccmC	548	183	TCT (S) => TTT (F)	1
308	ccmC	568	190	CCT (P) => TCT (S)	1
309	ccmC	575	192	CCC (P) => CTC (L)	1
310	ccmC	605	202	TCC (S) => TTC (F)	1
311	ccmC	608	203	CCC (P) => CTC (L)	0.89
312	ccmC	614	205	TCA (S) => TTA (L)	0.78
313	ccmC	619	207	CGT (R) => TGT (C)	0.78
314	ccmC	650	217	CCT (P) => CTT (L)	0.78
315	ccmC	656	219	CCA (P) => CTA (L)	0.89
316	ccmC	673	225	CCT (P) => TCT (S)	0.78
317	cox2	71	24	TCT (S) => TTT (F)	1
318	cox2	161	54	TCA (S) => TTA (L)	0.95
319	cox2	163	55	CGG (R) => TGG (W)	1
320	cox2	253	85	CGG (R) => TGG (W)	1
321	cox2	278	93	CCG (P) => CTG (L)	1
322	cox2	379	127	CGG (R) => TGG (W)	1
323	cox2	443	148	ACG (T) => ATG (M)	1
324	cox2	461	154	CCA (P) => CTA (L)	1
325	cox2	476	159	TCA (S) => TTA (L)	1
326	cox2	544	182	CCT (P) => TCT (S)	1
327	cox2	557	186	CCT (P) => CTT (L)	1
328	cox2	581	194	TCA (S) => TTA (L)	1
329	cox2	632	211	TCG (S) => TTG (L)	0.84
330	cox2	698	233	ACG (T) => ATG (M)	1
331	cox2	742	248	CGG (R) => TGG (W)	1
332	rps13	5	2	TCA (S) => TTA (L)	0.6
333	rps13	26	9	TCA (S) => TTA (L)	0.9
334	rps13	56	19	TCA (S) => TTA (L)	0.9
335	rps13	100	34	CGT (R) => TGT (C)	0.9
336	rps13	287	96	TCG (S) => TTG (L)	1
337	rps4	133	45	CCG (P) => TCG (S)	0.67
338	rps4	164	55	TCA (S) => TTA (L)	1
339	rps4	184	62	CCC (P) => TCC (S)	0.83
340	rps4	193	65	CAT (H) => TAT (Y)	1
341	rps4	257	86	CCA (P) => CTA (L)	1
342	rps4	266	89	CCA (P) => CTA (L)	0.83
343	rps4	278	93	TCG (S) => TTG (L)	0.67
344	rps4	290	97	CCG (P) => CTG (L)	0.83
345	rps4	335	112	CCG (P) => CTG (L)	1
346	rps4	482	161	TCA (S) => TTA (L)	1
347	rps4	914	305	TCG (S) => TTG (L)	0.83
348	rps4	925	309	CAT (H) => TAT (Y)	0.83
349	rps4	935	312	CCA (P) => CTA (L)	0.67
350	rps4	950	317	TCT (S) => TTT (F)	1
351	rps4	1001	334	CCA (P) => CTA (L)	0.83
352	rps4	1010	337	CCT (P) => CTT (L)	1
353	rps4	1015	339	CGG (R) => TGG (W)	1
354	nad1	8	3	CCT (P) => CTT (L)	0.9
355	nad1	65	22	TCC (S) => TTC (F)	1
356	nad1	100	34	CCT (P) => TCT (S)	0.9
357	nad1	149	50	GCG (A) => GTG (V)	0.9
358	nad1	209	70	TCC (S) => TTC (F)	1
359	nad1	308	103	TCA (S) => TTA (L)	1
360	nad1	434	145	ACT (T) => ATT (I)	1
361	nad6	7	3	CTT (L) => TTT (F)	1
362	nad6	83	28	TCG (S) => TTG (L)	1
363	nad6	88	30	CCC (P) => TTC (F)	0.7
364	nad6	89	30	CCC (P) => TTC (F)	0.7
365	nad6	95	32	CCA (P) => CTA (L)	1
366	nad6	103	35	CGC (R) => TGC (C)	1
367	nad6	161	54	CCA (P) => CTA (L)	1
368	nad6	169	57	CAT (H) => TAT (Y)	1
369	nad6	191	64	TCA (S) => TTA (L)	1
370	nad6	446	149	TCC (S) => TTC (F)	1
371	nad6	463	155	CCT (P) => TCT (S)	0.8
372	nad6	569	190	TCT (S) => TTT (F)	1
373	nad2	26	9	TCC (S) => TTC (F)	0.89
374	nad2	203	68	TCT (S) => TTT (F)	0.67
375	nad2	206	69	TCC (S) => TTC (F)	1
376	nad2	230	77	TCT (S) => TTT (F)	1
377	nad2	236	79	TCC (S) => TTC (F)	0.67
378	nad2	251	84	CCA (P) => CTA (L)	1
379	nad2	262	88	CGC (R) => TGC (C)	1
380	nad2	289	97	CAT (H) => TAT (Y)	1
381	nad2	296	99	TCA (S) => TTA (L)	1
382	nad2	323	108	CCT (P) => CTT (L)	1
383	nad2	392	131	TCG (S) => TTG (L)	1
384	rps12	71	24	TCG (S) => TTG (L)	0.94
385	rps12	100	34	CGC (R) => TGC (C)	1
386	rps12	104	35	CCG (P) => CTG (L)	1
387	rps12	196	66	CAC (H) => TAC (Y)	0.94
388	rps12	221	74	TCG (S) => TTG (L)	0.88
389	rps12	269	90	TCG (S) => TTG (L)	0.94
390	rps12	284	95	TCC (S) => TTC (F)	0.76
391	nad3	5	2	TCA (S) => TTA (L)	0.79
392	nad3	44	15	CCG (P) => CTG (L)	1
393	nad3	62	21	CCA (P) => CTA (L)	0.95
394	nad3	80	27	CCA (P) => CTA (L)	1
395	nad3	146	49	TCC (S) => TTC (F)	1
396	nad3	208	70	CCT (P) => TTT (F)	0.95
397	nad3	209	70	CCT (P) => TTT (F)	0.95
398	nad3	215	72	CCG (P) => CTG (L)	1
399	nad3	230	77	TCC (S) => TTC (F)	0.86
400	nad3	247	83	CCT (P) => TCT (S)	1
401	nad3	251	84	CCC (P) => CTC (L)	0.91
402	nad3	266	89	CCG (P) => CTG (L)	1
403	nad3	275	92	TCT (S) => TTT (F)	1
404	nad3	317	106	TCT (S) => TTT (F)	0.95
405	nad3	344	115	TCG (S) => TTG (L)	1
406	nad3	349	117	CGG (R) => TGG (W)	1
407	rps1	23	8	CCT (P) => CTT (L)	0.67
408	rps1	56	19	CCT (P) => CTT (L)	0.67
409	rps1	380	127	TCA (S) => TTA (L)	0.67

*The cutoff score (C-value) was set to 0.6.