TABLE 2.

List of genomes used in the comparative analysis section, including information about the seven newly sequenced XauB and XauC genomes.

Strain	Short name	Source	Replicons	Status	Length (bp)	CDS	Accession
X. citri pv. aurantifolii FDC 535	XauC 535	This work	Chromosome	372 contigs – N50 37-kb	5,226,212	4,364	LAUH00000000.1
X. citri pv. aurantifolii FDC 763	XauC 763	This work	Chromosome	314 contigs – N50 35-kb	4,984,643	4,045	LAUI00000000.1
X. citri pv. aurantifolii FDC 867	XauC 867	This work	Chromosome	303 contigs – N50 41-kb	5,014,602	4,085	LAUJ00000000.1
X. citri pv. aurantifolii FDC 1559	XauC 1559	This work	Chromosome pXfc38 pXfc43	complete	5,191,653 37,980 43,013	4,225 40 36	CP011160.1 CP011162.1 CP011161.1
X. citri pv. aurantifolii FDC 1609	XauC 1609	This work	Chromosome pXfc32 pXfc37 pXfc46	complete	5,164,518 32,021 37,089 46,049	4,175 34 42 38	CP011163.1 CP011165.1 CP011164.1 CP011166.1
X. citri pv. aurantifolii ICPB 10535	XauC 10535	NCBI	Chromosome	352 contigs – N50 29-kb	5,012,633	4,034	ACPY00000000.1
X. citri pv. aurantifolii ICPB 11122	XauB 11122	NCBI	Chromosome	244 contigs – N50 38-kb	4,879,662	3,918	ACPX00000000.1
X. citri pv. aurantifolii FDC 1561	XauB 1561	This work	Chromosome pXfb33	complete	4,993,063 33,022	4,048 42	CP011250.1 CP011251.1
X. citri pv. aurantifolii FDC 1566	XauB 1566	This work	Chromosome pXfb35	complete	4,926,567 35,521	3,983 44	CP012002.1 CP012003.1
X. citri pv. fuscans str. 4834-R	Xfus 4834	NCBI	Chromosome pla plb plc	complete	4,981,995 45,224 19,514 41,950	3,977 51 22 48	FO681494.1 FO681495.1 FO681496.1 FO681497.1
X. citri pv. citri str. 306	Xac 306 or A306	NCBI	Chromosome pXAC33 pXAC64	complete	5,175,554 33,700 64,920	4,321 42 73	AE008923.1 AE008924.1 AE008925.1