Table 5.
Performance of each label category with pretrained MIMIC models on i2b2 2012 task
word2vec | GloVe | fastText | ELMo | BERTBASE | BERTLARGE | |
---|---|---|---|---|---|---|
PROBLEM | 76.49 | 77.83 | 75.35 | 84.1 | 85.91 | 86.1 a |
TEST | 78.12 | 81.26 | 76.94 | 84.76 | 86.88 a | 86.56 |
TREATMENT | 76.22 | 78.52 | 76.88 | 83.9 | 84.27 | 85.09 a |
CLINICAL DEPT | 78.18 | 77.92 | 77.27 | 83.71 a | 77.92 | 78.23 |
EVIDENTIAL | 73.14 | 74.26 | 72.94 | 72.95 | 74.21 | 74.96 a |
OCCURRENCE | 64.77 | 64.19 | 61.02 | 66.27 a | 62.36 | 65.65 |
MIMIC: Medical Information Mart for Intensive Care;
aThe best performing result in the respective task.