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. 2018 Dec 22;16(1):20180064. doi: 10.1515/jib-2018-0064

Table 2:

Details on the two evaluation datasets and their corresponding cancer types, DisGeNET disease codes, and KEGG pathway IDs.

TCGA DisGeNET KEGG
Cancer Type Disease Code Pathway ID
Dataset I
SARC – Sarcoma C1261473
HNSC – Head and Neck Squamous Cell C1168401
GBM – Glioblastoma Multiforma C0017636 hsa05214
KIRC – Kidney Renal Clear Cell Carcinoma C0279702 hsa05211
LAML – Acute Myeloid Leukemia C0023467 hsa05221
LUAD – Lung Adenocarcinoma C0152013 hsa05223
THCA – Thyroid Carcinoma C0238463 hsa05216
UCEC – Uterine Corpus Endometrial Carcinoma C0476089 hsa05213
Dataset II
OV – Ovarian Serous Cystadenocarcinoma C0279663
PRAD – Prostate Adenocarcinoma C0007112 hsa05215
COAD – Colon Adenocarcinoma C0338106 hsa05210
LUSC – Lung Squamous Cell Carcinoma C0149782 hsa05223
BRCA – Breast Invasive Carcinoma C0853879 hsa05224
PAAD – Pancreatic Adenocarcinoma C0281361 hsa05212
STAD – Stomach Adenocarcinoma C0278701 hsa05226
CESC – Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma C0279671 hsa05165, hsa05203