Table 1.
Methylation and expression levels of the genes associated with the five top-ranked CpG islands in warts (W) compared to normal skin (NS).
| Methylation Levels | Expression Levels | |||||
|---|---|---|---|---|---|---|
| Gene | Mean.mean β value (NS) |
Mean.mean β value (W) |
Mean.mean β value (W-NS) |
p-value | logFC | p-value |
| ITGB5 | 0.386 | 0.428 | −0.042 | 0.0002 | 0.418 | 0.0060 |
| DTNB | 0.608 | 0.604 | 0.004 | 0.0138 | −0.029 | 0.8569 |
| RBFOX3 | 0.493 | 0.473 | 0.021 | 0.0543 | n/a | n/a |
| SLC6A9 | 0.497 | 0.499 | −0.002 | 0.0602 | 0.212 | 0.3504 |
| C2orf27A | 0.600 | 0.598 | 0.002 | 0.2827 | n/a | n/a |
Mean.mean β value = mean of mean methylation levels across all sites in a region; logFC = log fold change.