Table 2.
Gene | Exon | Codon, Mutation | Location in the Protein | Age of Onset, Clinical Characteristics | Pathogenic Nature | Country | References |
---|---|---|---|---|---|---|---|
APP | 3 | p.Glu145Lys | N-terminal | 50s/Familial, EOAD | Located outside of the amyloid progressing region | Korea | This study |
4 | p.Val225Ala | N-terminal | 65/Familial, EOAD | This study | |||
7 | pThr297Met | N-terminal | 60s/Familial, EOAD | This study | |||
8 | p. Pro484Ser | N-terminal | 60s/Familial, EOAD | This study | |||
14 | p.Val604Met | N-terminal | 55/Familial, EOAD | Pathogenic | Thailand | This study | |
16 | p.Val669Leu | N-terminal | 56 years; AD with a positive family history | Located nearby the β-secretase cleavage site of APP, right next to the Swedish APP (Lys, Met670/671Asn, Leu) mutation | Korea | This study | |
p.Asp678Asn | N-terminal | 59–65 years/familial, EOAD | Probably pathogenic, may enhance the toxic amyloid oligomer formation | Japan | Wakutani et al., 2004 [25] | ||
17 | p.Glu693del | N-terminal | 44 years/familial, EOAD/MCI | Enhances the toxic amyloid oligomer formation | Japan | Tomiyama et al., 2008 [26] | |
p. Val710Gly | TM-I | 65–82 years/Familial, AD, Parkinsonism | Probably pathogenic | China, Taiwan | Thajeb et al. 2009 [27] | ||
p. Thr714Ala | TM-I | 47–55 years/Familial, EOAD, epilepsy | Probably pathogenic | Iran | Pasalar et al. 2002 [28] | ||
p.Val715Met | TM-I | 41 years/ Familial EOAD |
Expressed in HEK293 cells, revealed 2* decrease in Abeta 40 levels. Might destroy the cleavage of gamma secretase at site at Abeta40 | Korea | Park et al., 2008 [29] | ||
p.Val717Ile | TM-I | 53 years/Familial, EOAD | Increased Abeta42/Abeta40 ratio in CHO and HEK293 cells | Japan | Yoshioka et al., 1991 [30] | ||
54 years/unknown, EOAD | Thailand | Jiao et al., 2014 [31] | |||||
p. Ile718Leu | TM-I | 65–82 years/Familial, AD, Parkinsonism | Probably pathogenic | China, Taiwan | Thajeb et al., 2009 [27] | ||
p.Leu720Ser | TM-I | 65–82 years/Familial, AD, Parkinsonism | Probably pathogenic | China, Taiwan | Thajeb et al. 2009 [27] | ||
4 | p.Leu85Pro | TM-I | 26 years, Juvenile EOAD | Abeta42/Abeta40 ratio increased in HEK293 | Japan | Ataka et al. 2004 [54] | |
p. Val96Phe | TM-I | EOAD, 49–60 years | 2.1 * increased Abeta 42/40 ratio in COS-1 cells | Japan | Kamino et al. 1996 [32] | ||
p.Val97Leu | TM-I | EOAD | Higher beta secretase activity in human neuroblastoma cells | China | Fang et al. 2006 [33] | ||
p. Phe105Cys | HL-I | 59 years/Familial, EOAD | Survival of mutant neuroblastoma cells dropped | China | Jiao et al., 2014 [31] | ||
5 | p. Gly111Val | HL-I | EOAD; 59 years/Familial | Increased ratios of secreted Aβ42/Aβ40 in vitro study | China | Qiu et al., 2019 [53] | |
p. Thr116Ile | HL-I | Late 30s–early-40s years; EOAD with a probable familial | Possible pathogenic mechanisms of mutation | Korea | This study | ||
p. Thr119Ile | HL-I | 49–64 years; EOAD with a probable familial | |||||
p.Glu120Lys | HL-I | 40–65 years/Familial, EOAD | Probably pathogenic | Iran | Akbari et al., 2013 [34] | ||
p.Glu123Lys | HL-I | 26–45 years, EOAD, myoclonus, epilepsy | Abeta42/total Abeta increased in COS-1 cells (2.7 *) and in HEK293 (4 *) cells | Japan | Yasuda et al. 1999 [35] | ||
p.Ala136Gly | TM-II | Unknown, EOAD | Survival of mutant neuroblastoma cells dropped, deleterious effects | China | Fang et al., 2007 [36] | ||
p.Met139Ile | TM-II | 38 years/Familial, EOAD | Ratio of Abeta42/total Abeta increased in COS-1 cell lines. | Korea | Kim et al., 2010 [37] | ||
p. Ile143Thr | TM-II | 26–45 years, EOAD, myoclonus, epilepsy | Abeta42/total Abeta increased in COS-1 cells (2.7 *) and in HEK293 (4 *) cells | Japan | Arai et al., 2008 [38] | ||
p.Tyr154Asn | TM-II | 40–60 years, EOAD, spastic paraparesis | Pathogenic nature might be associated with the missing aromatic ring. | Japan | Hattori et al., 2004 [47] | ||
6 | p.His163Arg | HL-II | 43–50 years/5 Japanese families, both familial and de novo cases | Abeta42/Abeta40 ratio increased 2 * in COS1 cell lines | Japan | Kamino et al., 1996 [32] | |
p.His163Arg | HL-II | 43–50 years/5 Japanese families, both familial and de novo cases | Abeta42/Abeta40 ratio increased 2 * in COS1 cell lines | Korea | Hong et al., 1997 [48] | ||
p.His163Pro | HL-II | 35 years/de novo EOAD, parkinsonism | The rigid proline might result abnormalities in the border of HL-II and TM-III | Korea | This study | ||
p.Trp165Gly | TM-III | 34–38 years; EOAD with strong familiar | The small glycine is a rare amino acid in the helix | Japan | Higuchi et al., 2000 [55] | ||
p.Trp165Cys | TM-III | 55 years; memory decline, followed by difficulty in finding ways and had a strong family history of dementia | Increased Aβ42 and decreased Aβ40 production in vitro; elevated Aβ42/Aβ40 ratio | Korea | This study | ||
45 years; EOAD, a severe form of the illness, with cerebral and cerebellar atrophies and rapid deterioration | India | Syama et al., 2018 [49] | |||||
p.Ile167del | TM-III | 38 years/familial; EOAD, spastic paraparesis | Deletion might result abnormal conformation in TM-III | China | Jiao et al., 2014 [31] | ||
p.Ser169del | TM-III | EOAD, 42–50 years/familial | Missing –OH group might result a missing H-bound in the TM-III | China | Guo et al., 2010 [43] | ||
p.Leu173Phe | TM-III | 47–50/familial; EOAD with parkinsonism | Elevated Abeta42 levels and Abeta42/Abeta40 ration in neuroblastoma cells | Japan | Kasuga et al. 2009 [50] | ||
7 | p.Glu184Asp | HL-III | 40s years; EOAD, DLB-like phenotype | The smaller asparatic acid might change the loop conformation | Japan | Yasuda et al. 1997 [35] | |
p.Glu184Gly | HL-III | 40s years; probable autosomal dominant EOAD, frontal variant form | Resulting potential functional alterations; may also disturb the splicing near exon 7 | Thailand | This study | ||
p.Gly206Ser | TM-IV | 30–35 years/familial, EOAD | Probably pathogenic | Korea | Park et al., 2008 [29] | ||
p.Gly209Arg | TM-IV | 46–53 years, EOAD | Arginine might result extra stress inside the helix and form abnormal hydrogen bonds | Japan | Sugiyama et al., 1999 [44] | ||
p.Gly209Ala | TM-IV | 54 years; MCI with depression, followed by progressive deterioration in verbal and visual memory | The extra –CH3 group in alanine might result extra stress inside the TM-IV region | Korea | This study | ||
p.Ile213Thr | TM-IV | 42–47 years, EOAD | Increased (1.7 * Abeta) | Japan | Kamino et al., 1996 [32] | ||
p.Gly217Asp | HL-IV | 42–47 years/familial, EOAD | Increased (1.7 * Abeta) | Japan | Takao et al., 2002 [52] | ||
p.Leu226Phe | TM-V | 37 years; de novo, Aβ plaques observed | Results elevated Abeta42/Abeta40 ratio in HEK293 cells | Korea | This study | ||
p.Leu226Arg | TM-V | 60 years/familial, EOAD | Probably pathogenic | China | Ma et al., 2019 [41] | ||
p.Glu311Arg | TM-V | > 65 years, familial, LOAD | Overproducing toxic Aβ species and enhancing tau phosphorylation | China | Dong et al., 2017 [56] | ||
p.Leu232Pro | TM-V | 37 years/familial; EOAD | The rigid proline might result serious torsion in the TM-V since proline is helix breaker | Korea | This study | ||
p.Met233Thr | TM-V | 34 years/de novo, EOAD, rapid progressive memory impairment | Elevated (3.2 *) Abeta42/Abeta40 levels in CHO cells | Korea | Park HK et al., 2008 [29] | ||
p.Phe237Ile | TM-V | 35 years/de novo, EOAD, spastic paraparesis | Probably pathogenic | Japan | Sodeyama et al. 2001 [57] | ||
p.Leu248Pro | TM-VI | 42 years/familial, EOAD | Proline is a helix breaker, resulting in torsion in TM-IV | China | Jiao et al., 2014 [31] | ||
p.Leu250Val | TM-VI | 40–51 years/Familial, EOAD, myoclonus, seizures | Probably pathogenic | Japan | Furuya t al., 2003 [58] | ||
8 | p.Ala260Val | TM-VI | 27–46 years/Familial, EOAD, Pick inclusions | 1.5 * Increased Abeta42/total Abeta in COS1 cells | Japan | Ikeda et al., 1996 [59] | |
p.Gly266Ser | HL-VI(a) | 35–44 years, EOAD, spastic paraparesis, aphasia | Probably pathogenic | Japan | Matsubara-Tsutsui et al., 2002 [60] | ||
p.Arg 269His | HL-VI(a) | 46–67 years/Familial, EOAD, myoclonus | Unknown | Japan | Kamimura el al., 1998 [61] | ||
p.Glu273Ala | HL-VI(a) | 46–67 years/Familial, EOAD, myoclonus | Unknown | Japan | Kamimura el al., 1998 [61] | ||
p.Glu280Ala | HL-VI (MA) | 48–57 years/Familial, EOAD, parkinsonism | Probably pathogenic | Japan | Tanahashi et al., 1996 [62] | ||
p.Glu280Lys | HL-VI (MA) | 48–57; EOAD | Probably pathogenic | Malaysia | This study | ||
p.Leu282Phe | HL-VI (MA) | 51 years, familial, EOAD | Probably pathogenic | Japan | Hamaguchi et al., 2009 [63] | ||
p.Pro284Leu | HL-VI (MA) | 32 years, cotton-wool plaques and neurofibrillary tangles or amyloid angiopathy in brain | Probably pathogenic | Japan | Tabira et al., 2002 [64] | ||
p.Ala285Val | HL-VI (MA) | 46 year/de novo, EOAD | The Abeta42/total Abeta ratio increased; Abeta40/total Abeta and Abeta38/total Abeta ratios decreased | Korea | This study | ||
50.5 years, two families | Japan | Ikeuchi et al., 2008 [65] | |||||
p.Leu286Val | HL-VI (MA) | 47 years | Increases in the Abeta42/total Abeta ratio (1.5 *) and Abeta42/Abeta40 ratio (2.1 *) | Japan | Ikeuchi et al., 2008 [65] | ||
Intron 8 | Exon9 del | - | 47.5 years, in EOAD with spastic paraparesis | elevated Abeta42 levels and Abeta42/40 ratio were observed | Japan | Tabira et al., 2002 [64] | |
10 | p.Arg352Cys | HL-VI (b) | 56–62 years, EOAD, psychiatric, behavioral symptoms | Cysteine could result intramolecular disulfide bound | China | Jiang et al., 2015 [66] | |
11 | p.Gly378Glu | TM-VII | 37 years, EOAD, familiar positive | Abeta42/Abeta40 ratio increased (3.2 *) | Japan | Ikeda et al., 1996 [59] | |
p.Leu381Val | TM-VII | 30s years, AD and spastic paraparesis | Abeta42/Abeta40 ratio increased (1.9 *) | Japan | Ikeuchi et al., 2008 [65] | ||
p.Gly384Ala | TM-VII | 31–37 years, EOAD, senile plaques and tangles inside proband’s brain | Beta40 and the Abeta42/Abeta40 ratio decreased and increased significantly. Abeta42/total Abeta ratio increased (3.8 *) | Japan | Kamimura et al. 1998 [61] | ||
p.Leu392Val | TM-VII | 42 years, EOAD | Abeta42/Abeta40 ratio (2.4*). An increase in the Abeta42/Abeta40 ratio (2.9 *) | Japan | Ikeuchi et al. 2008 [65] | ||
p.Asn405Ser | HL-VII | EOAD, the patient has several senile plaques and tangles in the brain | It caused disturbances in the motor neuronal systems, leading to spastic paraparesis | Japan | Yasuda et al., 2000 [46] | ||
p.Gly417Ala | HL-VIII | 37 years; EOAD, parkinsonism, positive familiar | Pathogenic mechanism | Korea | This study | ||
12 | p.Ala431Val | HL-VIII | 16 months, t-tau and phospho-Tau levels increased in the CSF, and metabolic deficits were detected in several parts of the brain | Possibly pathogenic | Japan | Matsushita et al., 2002 [45] | |
p.Ala434Thr | HL-VIII | 38 years, EOAD, Hallucinations, delusions |
Threonine might result extramolecular or intramolecular hydrogen bound | China | Jiao et al., 2014 [31] | ||
p.Thr440del | HL-VIII | 52 years, strong familiar history, EOAD and parkinsonism | Probably pathogenic, may alter the normal amyloid production | Japan | Ishikawa et al., 2005 [42] | ||
PSEN2 | 4 | p.Arg62Cys | N-term | 49 years, EOAD | Possibly pathogenic, may alter the normal amyloid production. | Korea | This study |
40–65 years, EOAD | Iran | Akbari et al., 2013 [34] | |||||
5 | p.Asn141Tyr | TM-II | 43–49 years, EOAD | No functional data | China | Niu et al., 2014 [39] | |
6 | p.His169Asn | TM-III | 50 years; de novo | It may result in major helix torsion due to histidine to asparagine substitution | Korea | This study | |
62 years; AD, de novo | China | Shi Z et al., 2015 [40] | |||||
68 years; FTD, progressive nonfluent aphasia, Familial | |||||||
63 years/Familial, LOAD | China | Ma et al., 2018 [41] | |||||
7 | p.Val214Leu | TM-IV | 56–70 years; AD | The extra CH3 group in leucine could result extra stress in the TM-IV region | Korea | This study |
Abbreviation: APP, amyloid precursor protein; PSEN1, presenilin-1; PSEN2, presenilin-2; AD, Alzheimer’s disease; EOAD, early-onset Alzheimer’s disease; LOAD, late-onset Alzheimer’s disease; MCI, mild cognitive impairment; DLB, dementia with Lewy bodies; FTD, frontotemporal dementia; HEK293, human embryonic kidney 293; CHO, Chinese hamster ovary; COS-1, cercopithecus aethiops kidney; TM, transmembrane domain; * multiplication sign.