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. 2019 Aug 26;244(14):1149–1161. doi: 10.1177/1535370219872759

Table 2.

Summary of sequencing data for each sample.

Sample name Sequence type Raw tag count Low quality tag count Invalid adapter tag count PolyA tag count Short valid length tag Clean tag count Q20 of clean tag (%) Percentage of clean tag (%)
A1 SE50 33,802,816 798,386 1,928,938 968 6,926,317 2,414,8207 99.2 71.44
A2 SE50 53,333,333 1,461,394 8,263,994 2188 19,097,315 24,508,442 99.3 45.95
A3 SE50 33,333,333 759,589 3,743,393 882 4,940,744 23,888,725 99.4 71.67
B1 SE50 44,444,444 1,158,469 5,440,175 938 13,658,455 24,186,407 99.4 54.42
B2 SE50 30,168,691 698,531 2,603,094 2321 1,930,997 24,933,748 99.1 82.65
B3 SE50 29,268,292 726,845 1,906,737 405 2,532,111 24,102,194 99.5 82.35

Note: Percentage (%) = clean tag count/raw tag count.