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. 2019 Oct 15;93(21):e02041-18. doi: 10.1128/JVI.02041-18

TABLE 1.

Modification of the vaccine/placebo hazard ratio of HIV-1 acquisition by FcγR SNPs and haplotypes in HVTN 505

Gene SNP Genotype or haplotype No. of cases (vaccine:placebo) HRa 95% CI P valueb Interaction P valuec Interaction q valuec
FCGR3B FCGR3B-5'utr44-T/A (rs34322334) TT 10:16 0.66 0.29, 1.5 0.317 0.033 0.178
TA/AAd 14:5 2.84 0.98, 8.18 0.054
FCGR3B-5'utr99-C/G (rs61803026) CC 9:14 0.68 0.29, 1.6 0.375 0.032 0.178
CG/GGd 18:7 2.6 1.06, 6.37 0.036
FCGR3B-5'utr222-G/A (rs34085961) GG 10:16 0.65 0.29, 1.49 0.308 0.023 0.178
GA/AAd 15:5 3.07 1.07, 8.75 0.036
FCGR2C FCGR2C-exon06-441-C/T (rs138747765) CC 17:20 0.86 0.44, 1.7 0.667 0.034 0.178
CT/TTd 9:1 9.79 1.17, 81.78 0.035
FCGR2C-intron06-590-G/A (rs78603008) GG 17:20 0.86 0.44, 1.7 0.667 0.034 0.182
GA/AAd 9:1 9.79 1.17, 81.78 0.035
FCGR2C-intron15-403-C/T (rs373013207) CC 15:18 0.88 0.43, 1.78 0.719 0.045 0.182
CT/TTd 12:3 3.92 1.08, 14.16 0.037
FCGR2C-intron15-433-G/A (rs201984478) GG 13:17 0.82 0.39, 1.73 0.601 0.042 0.182
GA/AAd 14:4 3.33 1.08, 10.29 0.036
CT/TTd 11:4 2.14 0.6, 7.55 0.239
FCGR3B FCGR3B-AGA
11:16 0.73 0.33, 1.62 0.439 0.047
+ 14:5 2.78 0.97, 7.94 0.057
FCGR2C FCGR2C-TATA
17:20 0.86 0.44, 1.7 0.667 0.034
+ 9:1 9.79 1.17, 81.78 0.035
a

Vaccine/placebo hazard ratio of HIV-1 acquisition in HVTN 505 for individuals with the given genotype at the given SNP.

b

P value of testing for HR = 1 for individuals with the given genotype at the given SNP.

c

Interaction P value of testing for a difference in HR between the two indicated genotype groups. Boldface indicates P ≤ 0.05 and q ≤ 0.2.

d

The genotypes containing at least one minor allele.