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. 2019 Oct 21;11(19):2491–2504. doi: 10.4155/fmc-2019-0181

Table 2. . X-ray data collection and refinement statistics of p53-Y220C ligand structures.

Compound PK9284 PK9318 PK9320 PK9324 PK9327 PK9328
Data collection            
Space group P212121 P212121 P212121 P212121 P212121 P212121
a (Å) 65.11 64.83 64.89 64.89 65.08 65.11
b (Å) 71.26 71.18 71.17 71.25 71.22 71.21
c (Å) 105.31 104.98 105.02 105.06 105.27 105.35
Molecules/AU 2 2 2 2 2 2
Resolution (Å) 29.6–1.55 (1.63–1.55) 29.5–1.32 (1.39–1.32) 29.5–1.24 (1.31–1.24) 29.5–1.40 (1.48–1.40) 29.6–1.25 (1.32–1.25) 29.6–1.32 (1.39–1.32)
Unique reflections 71,228 112,690 137,227 96,032 129,162 114,821
Completeness (%) 99.8 (99.0) 98.6 (97.1) 99.3 (98.3) 99.6 (99.9) 95.5 (93.0) 99.5 (99.3)
Multiplicity 4.4 (4.3) 5.5 (5.4) 4.6 (4.6) 4.7 (4.8) 5.3 (5.4) 5.1 (4.8)
Rmerge (%) 3.6 (46.8) 6.9 (50.8) 3.8 (51.3) 5.0 (52.3) 5.4 (58.1) 4.9 (55.0)
Mean I/σ(I) 17.9 (2.9) 12.7 (3.2) 17.4 (3.3) 14.5 (2.9) 13.8 (2.8) 16.0 (3.3)
Wilson B value (Å2) 20.7 10.8 10.5 14.0 10.7 11.6
Refinement            
Rwork (%) 18.0 14.2 15.0 14.9 15.1 14.9
Rfree (%) 20.0 16.1 16.6 17.0 17.1 17.1
No. of atoms            
Protein§ 3072 3106 3112 3107 3104 3114
Zinc 2 2 2 2 2 2
Water 374 507 443 364 482 454
Ligands 38 71 60 52 48 54
RMSD bonds (Å) 0.006 0.004 0.005 0.005 0.005 0.005
RMSD angles (°) 0.8 0.8 0.8 0.8 0.8 0.8
Mean B2) 27.0 19.0 18.0 22.0 20.2 20.0
PDB entry 6GGA 6GGB 6GGC 6GGD 6GGE 6GGF

Values in parentheses are for the highest resolution shell.

Rwork and Rfree.#x00A0;= ∑||Fobs. - |Fcalc.|/∑|Fobs., where Rfree was calculated with 5% of the reflections chosen at random and not used in the refinement.

§

Number includes alternative conformations.

PDB: Protein Data Bank; RMSD: Root-mean-square deviation.