Table 2.

Recent published transcriptomic studies in chrysanthemum

Category	Material	Plant organ/developmental stage	Study objective	Methodology	Reference
Plant growth and development	C. lavandulifolium	Leaves in seedling and visible bud stage	Flowering	RNA-seq	125
	‘Fenditan’	Vegetative buds, floral buds, and buds	Flower development	RNA-seq	126
	‘Jinba’	Whorl petals at four developmental stages	Petal growth	RNA-seq	127
Stress resistance	‘Fall Color’	Leaves and roots	Drought stress	RNA-seq	128
	‘Jinba’	Leaves and roots	Salt stress	RNA-seq	129
	‘Jinba’	Seedlings	Cold stress	RNA-seq	130
	C. nankingense	Leaf	Heat stress	RNA-seq	131
	‘Nannongxuefeng’, ‘Qinglu'	Roots	Waterlogging stress	RNA-seq	132
	‘Nannongxunzhang’	Leaf	Aphid stress	miRNAs	134
	‘Zaoyihong’	Leaf	Disease	RNA-seq	135
	‘Shinm’	Leaf	RNA viruses	Microarray	136
	‘C029’, ‘C008’	Leaf	White rust	RNA-seq	137
Secondary metabolism	‘Purple Reagan’	Ray florets at five developmental stages	Anthocyanin biosynthesis	RNA-seq	143
	‘Feeling White’, ‘Feeling Green’, and ‘Feeling Green Dark’	Ray florets	Chlorophyll metabolism in petal	Microarray	144
	‘Chuju’	Flowers at four developmental stages	Flavonoid biosynthesis	RNA-seq	145