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. 2019 Oct 1;85(20):e00885-19. doi: 10.1128/AEM.00885-19

TABLE 2.

Collection information, assembly statistics, and pathogenicity phenotyping of different pepper varieties for the X. perforans strains sequenced in this study

Strain Host County No. of contigs N50a (kb) Genome size (Mb) GenBank accession no.
AL1 Tomato Lee 86 1.78 5.02 SMVJ00000000
AL65 Pepper Lee 58 1.91 5.02 SMVI00000000
AL66 Pepper Lee 52 2.49 5.02 SMVH00000000
AL57 Tomato Lee 55 2.68 4.97 SMVC00000000
AL33 Tomato Tuscaloosa 60 2.27 5.22 SMVE00000000
AL37 Tomato Tuscaloosa 98 1.31 5.28 SMVD00000000
ALS7B Pepper Tuscaloosa 65 1.87 5.06 SMVG00000000
ALS7E Pepper Tuscaloosa 88 1.39 5.15 SMVF00000000
a

N50, minimum contig length needed to cover 50% of the genome.