Table 3.
Summary of Illumina RNA-sequencing.
Sample | Raw Reads | Clean Reads | Clean Bases (G) | Total mapped reads | Mapping rate (%) |
---|---|---|---|---|---|
S1_1 | 49,022,606 | 48,474,096 | 7.27 | 41,483,460 | 85.58 |
S1_2 | 48,375,304 | 47,857,452 | 7.18 | 40,130,002 | 83.85 |
S1_3 | 50,839,914 | 49,433,588 | 7.42 | 41,993,190 | 84.95 |
S2_1 | 58,645,596 | 58,018,926 | 8.7 | 50,391,040 | 86.85 |
S2_2 | 55,158,816 | 54,515,864 | 8.18 | 47,983,332 | 88.02 |
S2_3 | 46,277,122 | 45,839,116 | 6.88 | 40,461,148 | 88.27 |
S3_1 | 47,068,706 | 45,955,414 | 6.89 | 40,193,166 | 87.46 |
S3_2 | 48,714,736 | 47,383,326 | 7.11 | 41,088,574 | 86.72 |
S3_3 | 52,899,086 | 51,759,904 | 7.76 | 45,315,526 | 87.55 |