Table 1.
Band | Protein | Gene | Nominal | pI | Peptide | Sequence | |||
---|---|---|---|---|---|---|---|---|---|
no. | Fraction | name | name | AC | mass | value | Score | no. | coverage (%) |
Patient A | |||||||||
1 | Alb | Serum Alb | ALBU_HUMAN | P02768 | 71,317 | 5.92 | 104 | 11 | 26 |
2 | α1 | Uromdulin | UROM | P07911 | 72,451 | 5.05 | 24 | 2 | 3 |
3 | Alpha‐1‐microglobulin | AMBP_HUMAN | P02760 | 39,886 | 5.95 | 136 | 4 | 15 | |
4 | α2 | Uromodulin | UROM | P07911 | 72,451 | 5.05 | 65 | 4 | 5 |
5 | Zinc‐alpha‐2‐glycoprotein | ZA2G_HUMAN | P25311 | 34,465 | 5.71 | 86 | 6 | 23 | |
6 | Alpha‐1‐microglobulin | AMBP_HUMAN | P02760 | 39,886 | 5.95 | 70 | 8 | 19 | |
7 | βa | RBP 4 | RET4_HUMAN | P02753 | 23,337 | 5.76 | 68 | 4 | 30 |
8 | βc | Serotransferrin | TRFE_HUMAN | P02787 | 79,294 | 6.81 | 22 | 3 | 7 |
9 | Prostaglandin‐H2 d‐isomerase | PTGDS_HUMAN | P41222 | 21,243 | 7.66 | 88 | 2 | 8 | |
10 | Ig kappa chain C region | IGKC_HUMAN | P01834 | 11,773 | 5.58 | 31 | 2 | 32 | |
11 | Lysozyme C | LYZ_HUMAN | P61626 | 16,982 | 9.38 | 79 | 3 | 19 | |
11 | Cystatin‐C | CYTC_HUMAN | P01034 | 16,017 | 9.00 | 176 | 3 | 19 | |
12 | ϒ | Ig gamma‐1 chain C region | IGHG1_HUMAN | P01857 | 36,596 | 8.46 | 81 | 3 | 50 |
13 | Ig kappa chain C region | IGKC_HUMAN | P01834 | 11,773 | 5.58 | 123 | 3 | 48 | |
Patient B | |||||||||
1 | X | Transthyretin | TTHY_HUMAN | P02766 | 15,991 | 5.52 | 79 | 3 | 17 |
2 | Alb | Serum Alb | ALBU_HUMAN | P02768 | 71,317 | 5.92 | 254 | 12 | 48 |
3 | α1 | Alpha‐1‐antitrypsin | A1AT_HUMAN | P01009 | 46,878 | 5.37 | 166 | 4 | 10 |
4 | Alpha‐1B‐glycoprotein | A1BG_HUMAN | P04217 | 54,790 | 5.56 | 66 | 9 | 24 | |
5 | Alpha‐1‐microglobulin | AMBP_HUMAN | P02760 | 39,886 | 5.95 | 76 | 10 | 21 | |
6 | α2 | Angiotensinogen | ANGT_HUMAN | P01019 | 53,406 | 5.87 | 100 | 3 | 8 |
7 | Vitamin D binding protein | VTDB_HUMAN | P02774 | 54,526 | 5.40 | 77 | 10 | 32 | |
8 | Apolipoprotein A‐IV | APOA4_HUMAN | P06727 | 45,371 | 5.28 | 21 | 3 | 13 | |
9 | Zinc‐alpha‐2‐glycoprotein | ZA2G_HUMAN | P25311 | 34,465 | 5.71 | 108 | 4 | 10 | |
10 | Alpha‐1‐microglobulin | AMBP_HUMAN | P02760 | 39,886 | 5.95 | 130 | 10 | 31 | |
11 | βa | Plasma protease C1 inhibitor | IC1_HUMAN | Q96FE0 | 55,347 | 6.09 | 89 | 7 | 19 |
12 | Complement C1s subcomponent | C1S_HUMAN | Q9UCV3 | 78,174 | 4.86 | 73 | 9 | 19 | |
13 | Antithrombin‐III | ANT3_HUMAN | Q9UC78 | 53,025 | 6.32 | 60 | 7 | 21 | |
14 | Spermatogenesis‐associated protein 7 | SPAT7_HUMAN | Q9P0W8 | 68,190 | 5.90 | 35 | 3 | 7 | |
15 | Vitamin D binding protein | VTDB_HUMAN | P02774 | 54,526 | 5.40 | 103 | 7 | 28 | |
16 | Apolipoprotein A‐IV | APOA4_HUMAN | P06727 | 45,371 | 5.28 | 28 | 3 | 21 | |
16 | Complement C3 fragment | CO3_HUMAN | P01024 | 188,569 | 6.02 | 67 | 9 | 10 | |
17 | RBP 4 | RET4_HUMAN | P02753 | 23,337 | 5.76 | 81 | 7 | 45 | |
18 | β | Apolipoprotein A‐IV | APOA4_HUMAN | P06727 | 45,371 | 5.28 | 169 | 8 | 21 |
19 | Serotransferrin | TRFE_HUMAN | P02787 | 79,294 | 6.81 | 148 | 6 | 10 | |
20 | Hemopexin | HEMO_HUMAN | P02790 | 52,385 | 6.55 | 56 | 5 | 16 | |
21 | β2m | B2MG_HUMAN | P61769 | 13,715 | 5.30 | 34 | 3 | 14 | |
22 | Y | Pigment epithelium derived factor | PDEF_HUMAN | P36955 | 46,454 | 5.97 | 220 | 8 | 20 |
23 | Beta‐2‐glycoprotein 1/Apolipoprotein H | APOH_HUMAN | P02749 | 39,548 | 8.34 | 55 | 4 | 17 | |
24 | Complement factor H related protein 1 | PHR1_HUMAN | Q03591 | 38766 | 7.38 | 37 | 6 | 18 | |
25 | Apolipoprotein A‐I | APOA1_HUMAN | P02647 | 30,759 | 5.56 | 80 | 9 | 32 | |
25 | Complement factor D | CFAD_HUMAN | P00746 | 27,529 | 7.99 | 79 | 7 | 27 | |
26 | Ig kappa chain C region | IGKC_HUMAN | P01834 | 11,773 | 5.58 | 85 | 3 | 18 | |
27 | ϒ | Ig kappa chain C region | IGKC_HUMAN | P01834 | 11,773 | 5.58 | 97 | 2 | 18 |
28 | Beta‐2‐glycoprotein 1/Apolipoprotein H | APOH_HUMAN | P02749 | 39,548 | 8.34 | 63 | 6 | 28 | |
29 | Beta‐2‐glycoprotein 1/Apolipoprotein H | APOH_HUMAN | P02749 | 39,548 | 8.34 | 337 | 15 | 54 | |
29 | Apolipoprotein A‐IV | APOA4_HUMAN | P06727 | 45,371 | 5.28 | 62 | 12 | 29 | |
30 | Immunoglobulin light chain | gi218783334 | BAH03697 | 23,438 | 8.31 | 55 | 5 | 39 | |
31 | Z | Ig gamma‐1 chain C region | IGHG1_HUMAN | P01857 | 36,596 | 8.46 | 63 | 2 | 9 |
31 | Ig kappa chain C region | IGKC_HUMAN | P01834 | 11,773 | 5.58 | 116 | 4 | 51 | |
31 | Ig gamma‐3 chain C region | IGHG3_HUMAN | P01860 | 42,287 | 8.23 | 57 | 3 | 9 | |
32 | Apolipoprotein A‐IV | APOA4_HUMAN | P06727 | 45,371 | 5.28 | 29 | 6 | 18 | |
33 | Lysozyme C | LYZ_HUMAN | P61626 | 16,982 | 9.38 | 95 | 6 | 37 | |
33 | Cystatin‐C | CYTC_HUMAN | P01034 | 16,017 | 9.00 | 62 | 5 | 45 |
The protein band number used in Figure 4c, protein identity, gene name, AC, normal mass, pI value, score, number of peptide matches (peptide no.), and sequence coverage.
AC, accession code.