Supplementary Table 2.
Operational taxonomic units (OTUs) of identified Oomycetes. The OTU running number, frequency of occurrence (number of air samples in which the OTU was detected), best fitting NCBI accession numbers sorted by similarity score, taxonomic family, genus, and species name according to NCBI data base (if determined) and host plant families (numbers specify the corresponding host plant to the accession number of the pathogen). Species names are listed if available from NCBI sequences with sequence identity scores ≥ 97%.
| OTU | Frequency of occurrence | NCBI accession numbers and similarity scores | Family, genus, species | Host plant family of best match sequences | References | ||
|---|---|---|---|---|---|---|---|
| Total | Coarse | Fine | |||||
| 1 | 20 | 20 | AY198279 (100%), AY198276 (97%) | Peronosporaceae, Peronospora sp. | Caryophyllaceae | (Voglmayr, 2003) | |
| 2 | 17 | 17 | AY198300 (100%), AY198301 (99%), AY198298 (98–99%) | Peronosporaceae, Peronospora sp. | Rubiaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 3 | 17 | 17 | AY919304 (98–99%), AY198246 (99%) | Peronosporaceae, Peronospora conglomerata | Geraniaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 4 | 16 | 16 | AY198244 (99%), AY198243 (97%) | Peronosporaceae, Peronospora sp. | Veronicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 5 | 15 | 15 | AY198243 (99%), AY198241 (99%) | Peronosporaceae, Peronospora sp. | Veronicaceae | (Voglmayr, 2003) | |
| 6 | 14 | 14 | AF528557 (99–100%), AF528556 (99%), FM863723 (99%) | Peronosporaceae, Peronospora sp. | Amaranthaceae | (Byford, 1967; Choi et al., 2008) | |
| 7 | 15 | 14 | 1 | JF975613 (99%), JF975614 (99%), AY210985 (99%) | Peronosporaceae, Hyaloperonospora | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) |
| 8 | 11 | 11 | EU049225.1 (100%), EU049249.1 (99%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 9 | 9 | 9 | EF174902 (99%), EF174889 (98–100%) | Peronosporaceae, Peronospora sp. | Fabaceae | (Voglmayr, 2003) | |
| 10 | 7 | 7 | AY929824 (97–98%) | Albuginaceae, Wilsoniana amaranthi | Amaranthaceae | (Mirzaee et al., 2013) | |
| 11 | 6 | 6 | AY198240 (99–100%) | Peronosporaceae, Peronospora violae | Violaceae | (Voglmayr, 2003) | |
| 12 | 6 | 6 | KF888604 (99%), KF888591 (99%) | Peronosporaceae, Peronospora sp. | Amaranthaceae | (Klosterman et al., 2016) | |
| 13 | 5 | 5 | EU295529 (99%), AY695806 (99%) | Peronosporaceae, Peronospora arborescens | Papaveraceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 14 | 5 | 5 | KC494997 (96%), KC494998 (96%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr et al., 2014) | |
| 15 | 4 | 4 | AY531462 (100%), EU049260 (100%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 16 | 4 | 4 | EU049263 (99%), AY578093 (99%) | Peronosporaceae, Hyaloperonospora | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007; Coates and Beynon, 2010) | |
| 17 | 4 | 4 | DQ447120 (99%), EU049273 (99%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 18 | 3 | 3 | EU660054 (99%), EF126356 (99–100%) | Peronosporaceae, Pseudoperonospora sp. | Balsaminaceae, Cannabaceae, Cucurbitaceae | (Choi et al., 2005; Voglmayr et al., 2009) | |
| 19 | 3 | 3 | AY531452 (100%), AY210987 (99%) | Peronosporaceae, Hyaloperonospora parasitica | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 20 | 3 | 3 | EF174906 (99%), EF174949 (99%) | Peronosporaceae, Peronospora sp. | Fabaceae | (Voglmayr, 2003; Mouchacca, 2005) | |
| 21 | 3 | 3 | KM058096 (96%), AY198248 (90%) | Peronosporaceae, Peronospora sp. | Veronicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 22 | 2 | 2 | AY531425 (100%), EU049276 (99%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr et al., 2014) | |
| 23 | 2 | 2 | GU583839 (100%), GU583838 (100%) | Peronosporaceae, Hyaloperonospora erophilae | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007; Coates and Beynon, 2010) | |
| 24 | 2 | 2 | EU049279 (99%), AY531452 (99%), AY198254 (99%) | Peronosporaceae, Hyaloperonospora parasitica | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 25 | 2 | 2 | KM058101 (95%), KM058095 (94%) | Peronosporaceae, Peronospora sp. | Ranunculaceae | (Riethmuller et al., 2002; Voglmayr, 2003; Voglmayr et al., 2014) | |
| 26 | 2 | 2 | AY198280 (99%), KP271924 (98%) | Peronosporaceae, Peronospora sp. | 1. Caryophyllaceae, 2. Polygonaceae | (Voglmayr, 2003; PetrŽelová et al., 2015) | |
| 27 | 2 | 2 | EU049262 (99%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 28 | 2 | 2 | AY198307.1 (99–100%), HM636049.1 (99–100%), AY608613.1 (97–98%) | Peronosporaceae, Pseudoperonospora sp. | 1-3. Urticaceae 3. Cannabaceae |
(Voglmayr, 2003; Choi et al., 2005; Göker et al., 2007) | |
| 29 | 2 | 2 | KC495031.1 (99%), EU049259.1 (99%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007; Voglmayr et al., 2014) | |
| 30 | 2 | 2 | KM058095 (97%), KM058101 (97%), KM058097 (97%) | Peronosporaceae, Peronospora sp. | Ranunculaceae | (Riethmuller et al., 2002; Voglmayr, 2003) | |
| 31 | 2 | 2 | EU427470 (97%), DQ832718 (97%), DQ832717 (96%) | Peronosporaceae, Phytophthora sp. | 1/2. Fagaceae, Ericaceae, Oleaceae, Theaceae, Adoxaceae; 3. Fabaceae |
||
| 32 | 2 | 2 | EU427470 (96–97%), DQ832718 (96–97%), DQ832717 (96%) | Peronosporaceae, Phytophthora sp. | (Tyler et al., 2006; Grunwald et al., 2008) | ||
| 33 | 1 | 1 | KJ651417 (95%), HM636048 (94%), AY198307 (94%) | Peronosporaceae | Papaveraceae Urticaceae | (Voglmayr et al., 2014) | |
| 34 | 1 | 1 | AY198293 (99%) | Peronosporaceae, Peronospora valerianellae | Valerianaceae | (Voglmayr, 2003) | |
| 35 | 1 | 1 | HQ643443 (99%) | Pythiaceae, Pythium apiculatum | |||
| 36 | 1 | 1 | AY211009 (99%), AY211010 (99%), EU049264 (99%) | Peronosporaceae, Hyaloperonospora parasitica | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 37 | 1 | 1 | AY210994.1 (98–99%), EU049210.1 (98–99%), AY198259.1 (98%) | Peronosporaceae, Hyaloperonospora sp. | Brassicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 38 | 1 | 1 | KM058095 (99%), KM058097 (99%), FJ384778 (98%) | Peronosporaceae, Peronospora sp. | Ranunculaceae | (Riethmuller et al., 2002) | |
| 39 | 1 | 1 | AF241771 (100%) | Albuginaceae, Albugo tragopogonis | Asteraceae | (Long et al., 1975) | |
| 40 | 1 | 1 | GQ390795 (99%), FJ394345 (99%) | Peronosporaceae, Peronospora sp. | Lamiaceae | (Thines et al., 2009; Henricot et al., 2010; Nagy and Horváth, 2011) | |
| 41 | 1 | 1 | EU049207 (99%), EU049214 (99%) | Peronosporaceae, Hyaloperonospora hesperidis | Brassicaceae | (Göker et al., 2004; Voglmayr and Göker, 2011) | |
| 42 | 1 | 1 | EF174893 (100%), EF174898 (99%) | Peronosporaceae, Peronospora ervi | Fabaceae | (Voglmayr, 2003) | |
| 43 | 1 | 1 | AY198263 (99%), AY198264 (97%) | Peronosporaceae, Peronospora sp. | Boraginaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 44 | 1 | 1 | KP271924 (97%), KM058096 (97%) | Peronosporaceae, Peronospora sp. | Polygonaceae | (PetrŽelová et al., 2015) | |
| 45 | 1 | 1 | HM587262 (99%), FR825184 (99%) | Albuginaceae, Albugo sp. | Brassicaceae | (Kaur et al., 2011; Kemen et al., 2011) | |
| 46 | 1 | 1 | KP271924 (95%), AY198279 (95%), AY198282 (94%) | Peronosporaceae, Peronospora sp. | 1/3. Polygonaceae 2. Caryophylaceae | (Voglmayr, 2003; PetrŽelová et al., 2015) | |
| 47 | 1 | 1 | AY198296 (99%), AY198295 (97%), AY198298 (95%) | Peronosporaceae, Peronospora sp. | 1. Asteraceae 2. Lamiaceae 3. Rubiaceae | (Voglmayr, 2003) | |
| 48 | 1 | 1 | DQ643921 (99%) | Albuginaceae, Albugo portulacae | Portulacaceae | (Choi et al., 2007) | |
| 49 | 1 | 1 | HQ702191 88%), AY198247 (88%) | Peronosporaceae, Peronospora sp. | Lamiaceae, Scrophulariaceae | (Voglmayr, 2003; Nagy and Horváth, 2011) | |
| 50 | 1 | 1 | AY198276 (97%), AY198277 (97%) | Peronosporaceae, Peronospora sp. | Caryophyllaceae | (Voglmayr, 2003) | |
| 51 | 1 | 1 | AY198298 (94%), AY198296 (94%), AY198299 (94%) | Peronosporaceae, Peronospora sp. | 1/3. Rubiaceae 2. Asteraceae | (Voglmayr, 2003) | |
| 52 | 1 | 1 | AY198246 (96%), EU295529 (94%) | Peronosporaceae, Peronospora sp. | Geranicaceae, Papaveraceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 53 | 1 | 1 | AY198244 (95%), AY198243 (93%) | Peronosporaceae, Peronospora sp. | Veronicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 54 | 1 | 1 | AY198243 (95%), AY198241 (94%) | Peronosporaceae, Peronospora sp. | Veronicaceae | (Voglmayr, 2003; Göker et al., 2007) | |
| 55 | 1 | 1 | EU427470 (97%), DQ832718 (97%), DQ832717 (96%) | Peronosporaceae, Phytophthora sp. | 1/2. Fagaceae, Ericaceae, Oleaceae, Theaceae, Adoxaceae; 3. Fabaceae |
(Tyler et al., 2006; Grunwald et al., 2008) | |