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. 2019 Sep 22;10:218–230. doi: 10.1016/j.ijppaw.2019.09.005

Table 3.

Primers used for the amplification of per, COX1 and ITS2. Name, sequence, source and PCR protocols are described.

Gene Name Sequence Source Protocol
ID D A E C F
per per5 GCCTTCAGATACGGTCAAAC Williams and Villet (2013) 94 °C 5min 94 °C 30s 50 °C 1min 72 °C 30s x36 72 °C 7min
perreverse CCGAGTGTGGTTTGGAGATT
pbf14 GGCGTTGTCAAGCTCTAGC this study 94 °C 5min 94 °C 30s 48 °C 1min 72 °C 30s x36 72 °C 7min
pbf650-R CCACGAATGTGAACCAACTC
p249 GCAAACCAGTAACAGCACCT
p433-R GTGCCTGTACCGGTGTTG
COX1 LCO1490 GGTCAACAAATCATAAAGATATTGG Folmer et al. (1994) 94 °C 5min 95 °C 30s 45 °C 30s 72 °C 1min x35 72 °C 7min
HCO2198 TAAACTTCAGGGTGACCAAAAAATCA
ITS2 ITS4 TCCTCCGCTTATTGATATGC White et al. (1990) *94 °C 2min 94 °C 30s 44 °C 35s 72 °C 30s x38 72 °C 3min
ITS5.8 GGGACGATGAAGAACGCAGC

*ID = initial denaturation step, D = denaturation, A = annealing, E = extension, C = cycles of D-A-E, F = final extension.