Table 2.
Amino-acid identity of Flaviviridae-, Rhabdoviridae-, Chuviridae-, Phenuiviridae-, and Orthomyxoviridae-related viruses with their closest viral reference genome.
| Virus | Gene | Closest relative | % identity (aa) | Tick species | Prevalence |
|---|---|---|---|---|---|
| WhTV1-Thailand (WhTV1-T) | N |
Rhipicephalus-associated rhabdo-like virus (Rh. microplus/China/2016) |
96.72% | Rhipicephalus microplus | 21.68% |
| ORF2 | 92.84% | ||||
| ORF3 | 95.07% | ||||
| L | 97.39% | ||||
| WhTV2-Thailand (WhTV2-T) | L | Wuhan tick virus 2 (Rh. microplus/China/2012) | 92.28% | Rhipicephalus microplus | 18.18% |
| G | Wuhan tick virus 2 (Rh. microplus/Trinidad and Tobago/2017) | 90.71% | |||
| N | 88.56% | ||||
| CpTV2-Thailand (CpTV2-T) | L | Brown dog tick mivirus 1 (Rh. sanguineus/Trinidad and Tobago/2017) | 99.17% | Rhipicephalus sanguineus | 18.75% |
| G | 97.62% | ||||
| N | 96.50% | ||||
| LTPV-Thailand (LTPV-T) | L |
Rhipicephalus associated phlebovirus 1 (Rh. microplus/China/2016) |
99.67% | Rhipicephalus microplus | 20.98% |
| S | 97.48% | ||||
| BLTV4-Thailand (BLTV4-T) | Polyprotein | Trinbago virus (Rh. sanguineus/Trinidad and Tobago/2017) | 92.79% | Rhipicephalus sanguineus/microplus | 18.75/0.70% |
| Thailand tick thogotovirus (TT-THOV) | PB2 | Oz virus (Am. testudinarium/Japan/2013) | 70.79% | Rhipicephalus microplus | 2.80% |
| PB1-ORF1 | 80.14% | ||||
| PB1-ORF2 | 78.32% | ||||
| PA | 69.86% | ||||
| GP | 68.58% | ||||
| NP | 82.07% | ||||
| M | 78.52% |
The tick species and global prevalence of detection are indicated.