Table A1.
Plant developmental stages | |||||
---|---|---|---|---|---|
Vegetative | Reproductive | ||||
The closest neighbor | No. isolates | Accession no. | The closest neighbor | No. isolates | Accession no. |
Bacillus | 70.7% | Sphingomonas | 32.6% | ||
B. aryabhattai | 10 | EF114313 | S. yabuuchiae | 10 | AB071955 |
B. megaterium | 9 | JJMH01000057 | S. sanguinis | 8 | BCTY01000091 |
B. tequilensis | 7 | AYTO01000043 | S. zeae | 8 | KP999966 |
B. safensis | 4 | ASJD01000027 | S. parapaucimobilis | 4 | BBPI01000114 |
B. siamensis | 3 | AJVF01000043 | S. panni | 3 | AJ575818 |
B. altitudinis | 1 | ASJC01000029 | S. pseudosanguinis | 2 | AM412238 |
B. wiedmannii | 1 | LOBC01000053 | S. leidyi | 2 | AJ227812 |
B. cereus | 1 | AE016877 | S. melonis | 2 | KB900605 |
B. velezensis | 1 | AY603658 | S. molluscorum | 2 | AB248285 |
B. anthracis | 1 | AE016879 | S. insulae | 1 | EF363714 |
B. thuringiensis | 1 | ACNF01000156 | S. paucimobilis | 1 | BBJS01000072 |
B. nealsonii | 1 | EU656111 | Shingomonas sp. | 4 | AORY01000018 |
B. gibsonii | 1 | X76446 | Curtobacterium | 16% | |
Pseudomonas | 8.6% | C. oceanosedimentum | 14 | EF592577 | |
P. psychrotolerans | 4 | FMWB01000061 | C. herbarum | 5 | AJ310413 |
P. cichorii | 1 | FNIK01000055 | C. pusillum | 2 | AJ784400 |
Pantoea | 6.9% | C. albidum | 1 | AM042692 | |
P. stewartii | 1 | JPKO01000033 | C. plantarum | 1 | JN175348 |
P. ananatis | 2 | JMJJ01000010 | Methylobacterium | 13.8% | |
P. vagans | 1 | EF688012 | M. radiotolerans | 6 | CP001001 |
Paenibacillus | 3.5% | M. goesingense | 3 | AY364020 | |
P. barcinonensis | 1 | AJ716019 | M. rhodesianum | 2 | AB175642 |
P. xylanaxedens | 1 | CLG_48537 | M. populi | 2 | CP001029 |
Rhodococcus | 3.5% | M. komagatae | 2 | AB252201 | |
R. erythropolis | 2 | BCRM01000055 | M. phyllostachyos | 1 | jgi.1071174 |
Lysinibacillus | 1.7% | M. oryzae | 1 | CP003811 | |
L. fusiformis | 1 | AB271743 | M. marchantiae | 1 | FJ157976 |
Xanthomonas | 1.7% | M. fujisawaense | 1 | AB175634 | |
X. sacchari | 1 | Y10766 | M. aquaticum | 1 | LABX01000161 |
Leclercia | 1.7% | Paracoccus | 5.5% | ||
L. adecarboxylata | 1 | BCNP01000062 | P. yeei | 4 | JHWH01000002 |
Enterobacter | 1.7% | P. marcusii | 3 | Y12703 | |
E. cloacae | 1 | AXOM01000004 | P. aerius | 1 | KX664462 |
Acinetobacter | 4.8% | ||||
A. johnsonii | 3 | APON01000005 | |||
A. junii | 1 | APPX01000010 | |||
A. radioresistens | 1 | BAGY01000082 | |||
Acinetobacter sp. | 2 | NHRN01000069 | |||
Bacillus | 4.2% | ||||
B. siamensis | 2 | AJVF01000043 | |||
B. gibsonii | 1 | X76446 | |||
B. megaterium | 1 | JJMH01000057 | |||
B. niacini | 1 | AB021194 | |||
B. siralis | 1 | AF071856 | |||
Microbacterium | 4.2% | ||||
M. enclense | 5 | KQ758481 | |||
M. proteolyticum | 1 | KM359785 | |||
Pseudomonas | 2.8% | ||||
P. azotoformans | 2 | MNPV01000020 | |||
P. coleopterorum | 1 | KM888184 | |||
P. hunanensis | 1 | JX545210 | |||
Streptomyces | 2.1% | ||||
S. achromogenes subsp. rubradiris | 3 | AB184561 | |||
Xanthomonas | 1.4% | ||||
X. alfalfae subsp. citrumelonis | 2 | JX986962 | |||
Moraxella | 1.4% | ||||
M. osloensis | 2 | CP014234 | |||
Klebsiella | 1.4% | ||||
K. michiganensis | 2 | JQ070300 | |||
Enterobacter | 1.4% | ||||
E. xiangfangensis | 2 | FYBF01000083 | |||
Arthrobacter | 0.7% | ||||
A. enclensis | 1 | JF421614 | |||
Bradyrhizobium | 0.7% | ||||
B. daqingense | 1 | jgi.1041378 | |||
Brevundimonas | 0.7% | ||||
B. albigilva | 1 | KC733808 | |||
Chryseobacterium | 0.7% | ||||
C. hominis | 1 | jgi.1096633 | |||
Enhydrobacter | 0.7% | ||||
E. aerosaccus | 1 | AJ550856 | |||
Kitasatospora | 0.7% | ||||
K. arboriphila | 1 | AY442267 | |||
Leifsonia | 0.7% | ||||
L. shinshuensis | 1 | DQ232614 | |||
Metalliresistens | 0.7% | ||||
M. boonkerdii | 1 | EU177512 | |||
Micrococcus | 0.7% | ||||
M. yunnanensis | 1 | FJ214355 | |||
Pantoea | 0.7% | ||||
P. vagans | 1 | EF688012 | |||
Paenibacillus | 0.7% | ||||
P. naphthalenovorans | 1 | AF353681 | |||
Mycobacterium | 0.7% | ||||
M. phocaicum | 1 | AY859682 |