Table 1 |.
RP | Human phenotype | Mouse phenotype | Effects of RP downregulation on translation | Specialized translation functions |
---|---|---|---|---|
RPS6/eS6 | Unknown | • Embryonic lethal203 • Keratinocyte-specific heterozygosity: hyperpigmentation of ears, tail and footpads204 • Bone marrow-specific heterozygosity: decreased haematopoietic stem cell number, decreased erythropoiesis, macrocytic anaemia and haematopoietic defects205 • Thymus-specific heterozygosity: decrease in numbers of peripheral T cells206 |
Ribosome biogenesis defects in haploinsufficient embryos203 and in activated heterozygous T cells206 | NR |
RPS7/eS7 | Diamond–Blackfan anaemia207 | Missense mutations: microphthalmia and uveal coloboma, fused and disorganized vertebrae, cortical thinning, eye, brain and skeletal abnormalities, and white belly spot208 | Ribosome biogenesis defects in heterozygous mice208 and in patient cells207 | NR |
RPS10/eS10 | Diamond–Blackfan anaemia209 | Unknown | Ribosome biogenesis defect in patient cells209 | NR |
RPS14/uS11 | 5q-Myelodysplastic syndrome210 | Macrocytic anaemia211 | Decreased protein synthesis upon knockdown in TF-1 cells and ribosome biogenesis defects in 5q-myelodysplastic syndrome patient cells210 | NR |
RPS15a/uS8 | Diamond–Blackfan anaemia212 | Unknown | Ribosome biogenesis defect in K562 cells heterozygous for the mutation observed in patients with Diamond–Blackfan anaemia212 | NR |
RPS17/eS17 | Missense mutations in start codon: Diamond–Blackfan anaemia213,214 | Unknown | Unknown | NR |
RPS19/eS19 | Diamond–Blackfan anaemia215 | Missense mutation: hyperpigmentation of ears, tail and footpads; white belly spot; mild reduction in red blood cell counts; and erythroid defects204 | Decreased protein synthesis (knockdown in K562 cells or mouse erythroblasts)84,90 | Promotes cellular IRES activity in mouse erythroblasts84 |
RPS20/uS10 | Unknown | Missense mutation: hyperpigmentation of ears, tail and footpads204 | Unknown | NR |
RPS23/uS12 | Missense mutations: microcephaly , hearing loss, autism spectrum disorders, craniofacial abnormalities, atypical palm creases and finger pads and short fingers190 | Unknown | No global protein synthesis changes in patient cells190 | Promotes translation fidelity188 |
RPS24/eS24 | Diamond–Blackfan anaemia216 | Unknown | Unknown | NR |
RPS25/eS25 | Unknown | Unknown | – | • Promotes viral and cellular IRES
activity69,70 • Promotes translation of several hundred mRNAs in mES cells18 |
RPS26/eS26 | Diamond–Blackfan anaemia209,217 | Unknown | Ribosome biogenesis defects in patient cells209 | Promotes translation from start codons in Kozak sequence contexts in yeast218 |
RPS27/eS27 | Diamond–Blackfan anaemia and abnormal skin pigmentation219 | Unknown | Ribosome biogenesis defects (knockdown in K562 cells)219 | NR |
RPS28/eS28 | Missense mutation in start codon: Diamond–Blackfan anaemia220 | Unknown | Unknown | NR |
RPS29/uS14 | Diamond–Blackfan anaemia221 | Unknown | Ribosome biogenesis defect in patient mononuclear cells221 | NR |
RPS30/eS30 | Unknown Heterozygous deletion of entire FAU/MNSFβ gene: decreased female fertility222 | Unknown | NR | RPS30/eS30 |
RPSA/uS2 | Isolated congenital asplenia74 | • No phenotype observed for
heterozygote • Homozygote embryonic lethal74 |
No ribosome biogenesis defects in patient cells74 | NR |
RACK1 | Unknown | White belly spot and hypopigmented paws and tail87 | • Decreased protein synthesis in livers
from heterozygous mice87 • No change in protein synthesis upon knockdown in primary normal human dermal fibroblasts192 or S2 cells85 |
• CrPV and HCV IRES
translation85 • Translation of poxvirus genes192 |
RPLP1 | Unknown | Brain atrophy , male infertility and kinked tail223 | No global protein synthesis changes in mouse embryonic fibroblasts lacking RPLP1 (Ref.223) | NR |
RPL5/uL18 | Diamond–Blackfan anaemia, heart abnormalities, craniofacial defects (including cleft lip and palate), thumb malformations (including triphalangeal thumbs) and tumour predisposition207 | Unknown | Decreased protein synthesis (knockdown in HeLa cells)207 | NR |
RPL10/uL16 | Missense mutations: autism spectrum disorders, intellectual disability , microcephaly and seizures in males75,224 | Unknown | Decreased protein synthesis upon knockdown in zebrafish224 and upon introduction of the mutant human RPL10/uL16 alleles into yeast75 | NR |
RPL10a/uL1 | Unknown | Unknown | – | Promotes translation of several hundred genes, including several with known RPL10a/uL1-dependent IRES elements, in mES cells; promotes HCV and CrPV IRES activity18 |
RPL11/uL5 | Diamond–Blackfan anaemia, thumb malformations (including triphalangeal thumbs) and tumour predisposition207 | • Embryonic lethal • Heterozygosity induced in adult mice: anaemia and tumour predisposition225 |
Decreased protein synthesis (knockdown in HeLa cells207) and ribosome biogenesis defects in RPL11-deficient mouse embryonic fibroblasts and spleens225 | Promotes cellular IRES activity in mouse erythroblasts84 |
RPL13a/uL13 | Unknown | Macrophage-specific knockout: increased inflammation upon endotoxin stimulation226 | Increased expression of GAIT complex targets but no effect on global protein synthesis in macrophages lacking RPL13a/uL13 or upon knockdown in U937 cells226,227 | Inhibition of translation of target mRNAs as part of GAIT complex58 |
RPL15/eL15 | Diamond–Blackfan anaemia228 | Unknown | Decreased protein synthesis (knockdown in HeLa cells)228 | NR |
RPL21/eL21 | Missense mutation: hereditary hypotrichosis simplex76 | Unknown | Unknown | NR |
RPL22/eL22 | T cell acute lymphoblastic leukaemia229 | Knockout: αβ T cell ablation78 | No change in global protein synthesis in heterozygous mice229; mild decrease in protein synthesis in knockout mice78 | Represses smad1 translation in zebrafish29 |
RPL22L/eL22L | Unknown | Knockout: embryonic lethal79 | No change in global protein synthesis observed upon morpholino knockdown in zebrafish embryos29 | NR |
RPL24/eL24 | Unknown | Abnormal retinal cell differentiation, incomplete or absent optic nerve, white belly spot, kinked tail and polydactyly77 | Decreased protein synthesis in primary mouse embryonic fibroblasts from haploinsufficient mice77 | NR |
RPL26/uL24 | Diamond–Blackfan anaemia, cleft palate, missing or narrowed external auditory meatus, left kidney agenesis, bicuspid aortic valve, missing or fused radius and ulna, and oligodactyly230 | Unknown | Decreased protein synthesis (knockdown in HeLa cells)230 | NR |
RPL27/eL27 | Diamond–Blackfan anaemia and atrial septal defect219 | Unknown | Ribosome biogenesis defects (knockdown in K562 cells)219 | NR |
RPL27A/uL15 | Unknown | Cerebellar ataxia; hyperpigmentation of ears, tail, footpads and genital areas; and pancytopenia231 | Unknown | NR |
RPL29/eL29 | Unknown | Homozygous deletion: small size and increased bone fragility232,233 | Decreased protein synthesis in primary mouse embryonic fibroblasts from null mice233 | NR |
RPL31/eL31 | Diamond–Blackfan anaemia, triphalangeal thumb and thenar hypoplasia and fused radius and ulna234 | Unknown | Ribosome biogenesis defects in Diamond–Blackfan anaemia patient primary cells and upon knockdown in K562 cells234 | NR |
RPL35A/eL33 | Diamond–Blackfan anaemia, ventricular septal defect, hypertelorism and low-set ears235 | Unknown | Decreased protein synthesis (knockdown in UT-7/Epo and HEK293 cell lines)235 | NR |
RPL38/eL38 | Unknown | Midline facial cleft, microphthalmia and incomplete optic fissure closure, exencephaly , kinked tail and homeotic axial skeleton transformations13 | Decreased translation of several Hox genes but no effects on global translation in neural tubes and somites of haploinsufficient mice13 | Promotes translation of several Hox genes via IRES elements in their 5′ UTRs13,83 |
RPL40/eL40 | Unknown | Homozygous deletion of entire UBA52 gene: embryonic lethal194 | Decreased protein synthesis (knockdown in DLD-1 cells)194 | Promotes translation of VSV genes and several stress response transcripts in yeast88 |
Published human diseases and mouse models resulting from mutations in core ribosomal proteins (RPs) are listed with their phenotypes. All phenotypes are the result of haploinsufficient RP expression unless noted otherwise. Where known, the resulting impact on translation is also listed, as are any additional specialized translation functions, which may come from studies in a variety of model systems. CrPV, cricket paralysis virus; GAIT, γ-interferon inhibitor of translation; HCV, hepatitis C virus; IRES, internal ribosome entry site; mES, mouse embryonic stem; NR, not reported; UTR, untranslated region; VSV, vesicular stomatitis virus.