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. Author manuscript; available in PMC: 2020 Oct 1.
Published in final edited form as: Epilepsy Res. 2019 Jul 29;156:106181. doi: 10.1016/j.eplepsyres.2019.106181

Table 1:

Pathogenic variants and variants of unknown significance (VOUS) identified in this study

Gene Inheritance Inferred Effect GRCh37/hg19 Genomic Coordinate cDNA Change Protein Change CADD gnomAD (AC)
GNAO1 de novo Likely-pathogenic chr16:g.56368706G>C NM_138736.2:c.530G>C p.(Arg177Pro) 35.0 0
KCNB1 de novo Pathogenic chr20:g.47990350G>A NM_004975.2:c.1747C>T p.(Arg583*)^ 37.0 0
KCNB1 de novo Pathogenic chr20:g.47990988C>T NM_004975.2:c.1109G>A p.(Trp370*) 39.0 0
SLC35A2 de novo Likely-pathogenic chrX:g.48763706T>C NM_005660.1:c.389A>G p.(Tyr130Cys) 22.9 0
STXBP1 de novo Likely-pathogenic chr9:g.130416028T>C NM_003165.3:c.122T>C p.(Leu41Pro) 24.1 0
TBL1XR1 de novo Likely-pathogenic chr3:g.176771679C>T NM_024665.4:c.86G>A p.(Gly29Asp) 33.0 0
KIF1A unknown Pathogenic chr2:g.241723197C>T NM_001244008.1:c.757G>A p.(Glu253Lys)^ 34.0 0
19.7% Mosaic VOUS chr2:g.241662963C>T NM_001244008.1:c.4331G>A p.(Arg1444Gln) 35.0 1
FASN de novo VOUS chr17:g.80044266G>A NM_004104.4:c.3596C>T p.(Ala1199Val) 6.06 3
HDAC4 unknown VOUS chr2:g.239990214G>A NM_006037.3:c.2825C>T p.(Pro942Leu) 20.4 0
PNMAL1 unknown VOUS chr19:g.46973812T>C NM_018215.3:c.481A>G p.(Ile161Val) 9.21 0
PPP3CA unknown VOUS chr4:g.102015013G>T NM_000944.4:c.702C>A p.(Asp234Glu) 27.0 0
^,

recurrent pathogenic variant