Table 1. List of annotated HMA genes in maize.
Gene name | Primary transcript name | Chr | Bin | Genome location | Gene size (bp) | CDSsize (bp) | Exons | Length (aa) | Molecular weight (kDa) | Theoretical isoelectric point (pI) |
---|---|---|---|---|---|---|---|---|---|---|
ZmHMA1 | GRMZM2G067853_T02 | 5 | 5.03 | 52,146,625–52,168,252 | 21,627 | 2,472 | 13 | 823 | 87.86 | 6.67 |
ZmHMA2 | GRMZM2G099191_T01 | 5 | 5.03 | 56,451,481–56,458,107 | 6,626 | 3,300 | 10 | 1,099 | 117.86 | 6.30 |
ZmHMA3 | GRMZM2G175576_T02 | 2 | 2.06 | 159,040,587–159,044,553 | 3,966 | 2,697 | 5 | 898 | 92.56 | 6.67 |
ZmHMA4 | GRMZM2G455491_T01 | 2 | 2.06 | 159,019,693–159,023,011 | 3,318 | 2,895 | 5 | 964 | 96.02 | 7.84 |
ZmHMA5 | GRMZM2G144083_T01 | 2 | 2.04 | 19,244,753–19,250,983 | 6,230 | 2,556 | 6 | 851 | 112.43 | 6.34 |
ZmHMA6 | GRMZM2G315931_T01 | 4 | 4.08 | 197,229,916–197,239,315 | 9,399 | 2,787 | 17 | 928 | 97.36 | 7.10 |
ZmHMA7 | GRMZM2G029951_T01 | 5 | 5.04 | 121,445,070–121,449,579 | 4,509 | 2,943 | 10 | 980 | 106.28 | 5.33 |
ZmHMA8 | GRMZM5G855347_T01 | 1 | 1.03 | 16,331,867–16,338,054 | 6,187 | 2,640 | 16 | 879 | 101.48 | 6.61 |
ZmHMA9 | GRMZM2G404702_T01 | 9 | 9.04 | 109,908,973–109,914,816 | 5,843 | 3,072 | 10 | 1,023 | 109.52 | 5.31 |
ZmHMA10 | GRMZM2G143512_T01 | 2 | 2.04 | 19,329,257–19,337,335 | 8,078 | 3,000 | 6 | 999 | 102.37 | 6.46 |
ZmHMA11 | GRMZM2G010152_T01 | 4 | 4.10 | 236,277,989–236,283,316 | 5,327 | 2,997 | 9 | 998 | 107.58 | 5.33 |
ZmHMA12 | GRMZM2G151406_T01 | 9 | 9.04 | 109,906,735–109,908,497 | 1,761 | 1,200 | 4 | 400 | 42.3 | 5.6 |