Table 2.

Sequences that were cloned for functional validation.

Common SNP ID	Ref.	DNA sequence with variant site (underlined and capitalized)	Gene Implicated	Variant 1 (Var1)		Variant 2 (Var2)
rs9888739	17	GGTTCCATCTTCCCTGTTCAtattctttcCcaccatagccacctgagaccatctagttttctggcctctggtctctgggtttttgctagccttacatttttctttctttatgtttaaaaatttttttattgtggtaagggcacttaacatgagacctatcctcttaacagattttaaaatgtacaatgtaatactgtcatctaTTGGTGCAATGTTGTACAGC	ITGAM	C		G
rs10488631	52	TGTACAGGGAACCCCTTGTCctctccctgagctggGtgtgggtttgcaaggagacatgtgacccagaccaaccctgggagcagcagggcgcctgctgtctggccactcttactaggactgctgtGgcacttcctcccctagtgggtccctggtgcccatgaattgcagctcctgggtggtggtgggggcACTGTCTCCTG GGACTCCAG	IRF5	Var1	Var2	Var3	Var4
				GG	GA	AG	AA
rs3823536	35	CAGGTACCAAAGGCTGCTTCcatagctagtctagctgaacCatttccgagctacaaggcagtgaatgaaagtaaaaacaaagaaacactggttaaattttaaaaatttattctttctcttttgttgctgttgatttgttcttgagatggctacaacacCAGACAGAACAGTGCCCTCA	IRF5	C		A
rs12574073	39	GGCCCTGTTGTGTGATACCTtctgacacatacgtttttttgaaaaaagattgtctgctgggaactggactgaaaccaacatataacCgtttgtttcatactggttaggaagccaccaggaaggcctacccaaagtggttttaaatacatacacacacagtcctctcctctTAGAGCCAAGAACAGGCCAT	ETS1	C		T
rs10036748	35	CAGCATGGTGTGACCAAATCacagCgggtacaggagtaaaacagtaaccagtgggttggagagagaggcagacaaacaacctcctacaacgctgcctctctcaaatcaggtcggcctgacccaaccaggacatccgggccccaagtcacaggcagcactgggggtaagggtatgactcagaccccacagcttcctggggccccgaAAAAACTGGTGGGGGTATCC	TNIP1	C		G
rs5754217	53	Sequence forward: GGCAAGTCACTGGCTTCTTC Sequence reverse: CAAGGAAGCCAAATTGAGGA	UBE2L3	Insertion
rs969985	9	Sequence forward: CAGCAGCCAGAGCTTACTGA Sequence reverse: ACAGCCAACACTGATTGCAC	BLK	Insertion