Table 1.
miRWalk 2.0's 12 database lists.
| Resource | Version | Information |
|---|---|---|
| Putative miRNA-target interaction information | ||
| DIANA-microT (miRWalk) | 4.0 and 5.0 | miRNA binding sites within 3′-UTR |
| DIANA-microT-CDS (Microt4) | 5.0 | miRNA binding sites within CDS |
| miRanda | August 2010 | Locally executed for promoter, CDS, 5′- and 3′-UTR, and mitochondrial genomes and miRNA-miRNA interactions |
| miRBridge | 4.0 | miRNA binding sites within 3′-UTR |
| miRDB | 4.0 | miRNA binding sites within 3′-UTR |
| miRMap | January 2013 | miRNA binding sites within 3′-UTR |
| miRNAMap | September 2008 | miRNA binding sites within 3′-UTR |
| doRiNA (PicTar2) | 2.0 | miRNA binding sites within 3′-UTR |
| PITA | November 2007 | miRNA binding sites in CDS and 5′- and 3′-UTR, while locally executed for mitochondrial genes and miRNA-miRNA interactions |
| RNA22 | 2.0 | miRNA binding sites within CDS and 5′- and 3′-UTR |
| RNAhybrid | 2.1 | Locally executed for promoter, CDS, 5′- and 3′-UTR, and mitochondrial genomes and miRNA-miRNA interactions |
| TargetScan | 6.1 | Locally executed for promoter, CDS, 5′- and 3′-UTR, and mitochondrial genomes and miRNA-miRNA interactions |