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. 2019 Oct 24;13:1177932219884297. doi: 10.1177/1177932219884297

Table 5.

Selected broad-spectrum targets and docking parameters generated in AutoDock Tools.

SN Target protein name Source organism Gene name UniProt ID PDB ID Center grid box (points) Size (points) Spacing (Å) Curated/published binding sites
1 UDP-N-acetylglucosamine-1-carboxyvinyltransferase C. jejuni murA Q9PP65 5UJS Chain: A 21.438 × 6.362 × 21.807 94 × 94 × 94 0.375 Met91, Arg92, Gly114, Cys115, Ala116, Arg120, Gly164, Asp305, Arg326, Val327, Asn330, Arg397
2 1-Deoxy-D-xylulose-5-phosphate reductoisomerase E. coli dxr P45568 1ONN Chain: A 0.259 × –6.784 × 31.969 94 × 94 × 94 0.375 Ala112, Lys125, Arg133, Asp150, Glu152, His153, Ala155, Val178, Ser186, Arg216, Lys228, Glu231, Glu234, His257
3 DNA polymerase III alpha subunit E. coli DnaE P10443 4JOM Chain: A 11.727 × 0.517 × 16.011 100 × 100 × 100 0.375 Pro400, Asp401, Phe402, Asp403, Val404 Asp405, Lys553, Asp555, Phe556 Asp593, Asp706