Table 8. Genotype data of five cattle breeds included in PCA, WIDDE and multi-breed GWAS.
| Country | Breed | No. of cows | No. of cows after SNP quality control |
|---|---|---|---|
| DE | DE_DSN | 266 | 266 |
| DE_DN | 20 | 20 | |
| DE_HF | 50 | 50 | |
| PL | PL_BS | 34 | 34 |
| PL_DSN | 59 | 59 | |
| Sl | Sl_Si | 46 | 44 |
| Sl_BS | 36 | 36 | |
| Sl_HF | 14 | 14 | |
| CH | CH_OBV | 48 | 46 |
| CH_Si | 48 | 46 |
DE_DSN = black and white dual-purpose (Germany); DE_DN = red and white dual-purpose (Germany); DE_HF = Holstein Friesian (Germany); PL_BS = Brown Swiss (Poland); PL_DSN = black and white dual-purpose (Poland); Sl_Si = Simmental (Slovenia); Sl_BS = Brown Swiss (Slovenia); Sl_HF = Holstein Friesian (Slovenia); CH_OBV = dual-purpose Original Braunvieh (Switzerland); CH_Si = Simmental (Switzerland).