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. 2019 Jan 26;69(10):1678–1686. doi: 10.1093/cid/ciz069

Table 1.

Summary Statistics for the De novo Reference Genomes of the 2 Patients

Patient 1 Patient 2
Total bases 5 172 759 5 275 491
Mean depth of coverage 25.3X 74.1X
Number of contigs 28 46

References were assembled for the first temporal sample from each patient (patient_1_S1 and patient_2_S1; see Methods).