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. 2019 Apr 12;35(21):4229–4238. doi: 10.1093/bioinformatics/btz253

Table 4.

The accuracy of the constraints generated by different SolidBin modes

Mode SpeciesMock
StrainMock
SimHC
Sharon_partial
MetaHIT_partial
Acc (%) Num Acc (%) Num Acc (%) Num Acc (%) Num Acc (%) Num
SolidBin-SFS ratio×0.2 100.00 4 410 072 100.00 1 658 091 72.38 1 824 430 99.24 363 286 99.80 2 190 826
ratio×0.4 100.00 8 782 498 99.98 3 306 241 55.59 2 390 242 98.24 550 808 99.61 4 356 334
ratio×0.6 100.00 13 154 614 99.89 4 950 081 45.13 2 633 940 93.86 769 282 98.83 6 474 940
ratio×0.8 99.98 17 523 650 99.44 6 567 453 38.06 2 767 326 86.67 986 612 83.17 7 260 682
SoliBin-coalign 91.30 20 293 038 51.60 8 179 998 99.71 3 065 364 99.19 1 199 672 99.90 9 171 166
SolidBin-CL 99.99 1 370 250 256 99.62 67 069 672 100.00 188 819 244 99.96 3 955 520 99.95 237 793 612
SolidBin-SFS-CL ratio×0.2 100.00 4 369 002 100.00 1 646 968 94.36 1 810 484 99.24 360 192 99.81 2 172 750
ratio×0.4 100.00 8 727 240 99.98 3 249 328 89.83 2 376 178 98.60 547 706 99.71 4 336 152
ratio×0.6 100.00 13 071 540 99.89 4 834 258 87.06 2 619 628 97.43 766 180 99.14 6 448 034
ratio×0.8 99.98 17 416 512 99.44 6 382 828 85.28 2 752 684 95.74 983 508 92.36 7 228 632